DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Whamy and waslb

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_957353.2 Gene:waslb / 394034 ZFINID:ZDB-GENE-040426-718 Length:518 Species:Danio rerio


Alignment Length:657 Identity:155/657 - (23%)
Similarity:214/657 - (32%) Gaps:282/657 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DEMLQLYLRKANLSDDLERLPAIVRRAYVYD--------------IIRSNKEPGYWV-VISCSIS 86
            :|:|..:|.|..:|     |.:.|.:.|..|              :::.|.:..|:: ||.....
Zfish    24 NEVLFNHLGKKCIS-----LSSAVVQVYAADRNSSWVKKCCGVACLVKDNTQRSYYIRVIDMKDG 83

  Fly    87 SCQLHQPKVSLMLSTVVLNAA--VFFSFQPPSMQVSSDVFAHPPPAVRPPPHYADNVSINASLDG 149
            .....|.    |.:...:|.:  .|.:|...:.|:..: ||:...|.|       ..|....|.|
Zfish    84 KTLFEQE----MYNNFSINCSRPYFITFSGDNCQIGLN-FANEEEAKR-------FRSAIGELVG 136

  Fly   150 MKSSSSSNSLDRYLGAPPSVALAGPS-----FATSVLVS-------------------------- 183
            .||..:....:...|  |||: :|||     .||..:.:                          
Zfish   137 RKSRRTEKRREPPNG--PSVS-SGPSGPALPMATVDIKNPEITNQRYHNNTQMNNLQSNFNRAKD 198

  Fly   184 -SKG---------SKYEISGPVNFQHVSGDVTRDRTRNAFDL-NADPNDKVLRKYMMERGITEAD 237
             |||         ||.||..|.||:|| |.|..| ....||| |.||:   |:|.....||:|.:
Zfish   199 KSKGKNNNKKKKISKAEIGTPSNFRHV-GHVGWD-PNTGFDLNNLDPD---LKKLFDMCGISEDE 258

  Fly   238 ISDMRRQEVIKKIIHSNFTWMPPKSDLQAQPKVQDHARPLLYATISTNNQITPPPSPP-----PP 297
            :.|....:||..:|.........|::::.|                     .|||.||     ||
Zfish   259 LKDKETSKVIYDLIEKQGGVEAVKNEMRRQ---------------------APPPPPPSRGGAPP 302

  Fly   298 PIATISRPTEAPNFSNYASLTSRFVDISDMDLPAPTPAAPTPFQPAEVGSVIPVQVQPQQSVKPK 362
            |                               |.|..:||                         
Zfish   303 P-------------------------------PPPHNSAP------------------------- 311

  Fly   363 VPPPPSAVMAKNTHGYPAAIDIRQVRPSVAPKVANETYATISPQRKVGSMRVPPPAPPKPTIVPH 427
             ||||                                     |.|..|:   |||.||       
Zfish   312 -PPPP-------------------------------------PSRGRGA---PPPPPP------- 328

  Fly   428 TNSTISNGSLYAVSPVQYAPVAKPAPPAAPAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPT 492
                            ..||.:.| ||..|::|                    ....|..||||:
Zfish   329 ----------------SRAPTSAP-PPPPPSRP--------------------GMGAPPPPPPPS 356

  Fly   493 AASVGVPPPPPAPPAG--VPPAPPPMPVFGAGGAPPPPPPPSSGMAGVPPPPPMQKSQPKAVSAA 555
            ......|||||.|.:.  .|||||.:     ||||||||||       ||||......|......
Zfish   357 RGPTQAPPPPPPPHSASISPPAPPSI-----GGAPPPPPPP-------PPPPGPPPPGPPPAQDV 409

  Fly   556 STGGDP--RDAFLESIRQGVKLKKVDQKAATISGIKPRPERKPVTTD----FLSELKLGITLRRV 614
            .:|..|  |.|||:.||:|.:||||||.           .:.||:|.    .|.:::.||.|:.|
Zfish   410 DSGDSPGGRSAFLDQIREGAQLKKVDQN-----------NKPPVSTGGRGALLDQIRQGIQLKTV 463

  Fly   615 KNPADNP 621
            .:..::|
Zfish   464 TDAPESP 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 13/23 (57%)
waslbNP_957353.2 EVH1_WASP-like 37..131 CDD:269916 20/110 (18%)
PBD 215..270 CDD:279166 24/59 (41%)
WH2 415..438 CDD:280384 14/33 (42%)
WH2 444..469 CDD:280384 6/24 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3671
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
32.860

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