DRSC/TRiP Functional Genomics Resources

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Protein Alignment Whamy and waslb

DIOPT Version :10

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_957353.2 Gene:waslb / 394034 ZFINID:ZDB-GENE-040426-718 Length:518 Species:Danio rerio


Alignment Length:657 Identity:155/657 - (23%)
Similarity:214/657 - (32%) Gaps:282/657 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DEMLQLYLRKANLSDDLERLPAIVRRAYVYD--------------IIRSNKEPGYWV-VISCSIS 86
            :|:|..:|.|..:|     |.:.|.:.|..|              :::.|.:..|:: ||.....
Zfish    24 NEVLFNHLGKKCIS-----LSSAVVQVYAADRNSSWVKKCCGVACLVKDNTQRSYYIRVIDMKDG 83

  Fly    87 SCQLHQPKVSLMLSTVVLNAA--VFFSFQPPSMQVSSDVFAHPPPAVRPPPHYADNVSINASLDG 149
            .....|.    |.:...:|.:  .|.:|...:.|:..: ||:...|.|       ..|....|.|
Zfish    84 KTLFEQE----MYNNFSINCSRPYFITFSGDNCQIGLN-FANEEEAKR-------FRSAIGELVG 136

  Fly   150 MKSSSSSNSLDRYLGAPPSVALAGPS-----FATSVLVS-------------------------- 183
            .||..:....:...|  |||: :|||     .||..:.:                          
Zfish   137 RKSRRTEKRREPPNG--PSVS-SGPSGPALPMATVDIKNPEITNQRYHNNTQMNNLQSNFNRAKD 198

  Fly   184 -SKG---------SKYEISGPVNFQHVSGDVTRDRTRNAFDL-NADPNDKVLRKYMMERGITEAD 237
             |||         ||.||..|.||:|| |.|..| ....||| |.||:   |:|.....||:|.:
Zfish   199 KSKGKNNNKKKKISKAEIGTPSNFRHV-GHVGWD-PNTGFDLNNLDPD---LKKLFDMCGISEDE 258

  Fly   238 ISDMRRQEVIKKIIHSNFTWMPPKSDLQAQPKVQDHARPLLYATISTNNQITPPPSPP-----PP 297
            :.|....:||..:|.........|::::.|                     .|||.||     ||
Zfish   259 LKDKETSKVIYDLIEKQGGVEAVKNEMRRQ---------------------APPPPPPSRGGAPP 302

  Fly   298 PIATISRPTEAPNFSNYASLTSRFVDISDMDLPAPTPAAPTPFQPAEVGSVIPVQVQPQQSVKPK 362
            |                               |.|..:||                         
Zfish   303 P-------------------------------PPPHNSAP------------------------- 311

  Fly   363 VPPPPSAVMAKNTHGYPAAIDIRQVRPSVAPKVANETYATISPQRKVGSMRVPPPAPPKPTIVPH 427
             ||||                                     |.|..|:   |||.||       
Zfish   312 -PPPP-------------------------------------PSRGRGA---PPPPPP------- 328

  Fly   428 TNSTISNGSLYAVSPVQYAPVAKPAPPAAPAKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPT 492
                            ..||.:.| ||..|::|                    ....|..||||:
Zfish   329 ----------------SRAPTSAP-PPPPPSRP--------------------GMGAPPPPPPPS 356

  Fly   493 AASVGVPPPPPAPPAG--VPPAPPPMPVFGAGGAPPPPPPPSSGMAGVPPPPPMQKSQPKAVSAA 555
            ......|||||.|.:.  .|||||.:     ||||||||||       ||||......|......
Zfish   357 RGPTQAPPPPPPPHSASISPPAPPSI-----GGAPPPPPPP-------PPPPGPPPPGPPPAQDV 409

  Fly   556 STGGDP--RDAFLESIRQGVKLKKVDQKAATISGIKPRPERKPVTTD----FLSELKLGITLRRV 614
            .:|..|  |.|||:.||:|.:||||||.           .:.||:|.    .|.:::.||.|:.|
Zfish   410 DSGDSPGGRSAFLDQIREGAQLKKVDQN-----------NKPPVSTGGRGALLDQIRQGIQLKTV 463

  Fly   615 KNPADNP 621
            .:..::|
Zfish   464 TDAPESP 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:460490 13/23 (57%)
waslbNP_957353.2 EVH1_WASP-like 37..131 CDD:269916 20/110 (18%)
PBD 215..272 CDD:395634 24/61 (39%)
WH2_N-WASP_r1 416..440 CDD:409217 13/34 (38%)
actin-binding sequence 431..434 CDD:409217 2/2 (100%)
WH2_hN-WASP_r2_like 442..466 CDD:409218 7/23 (30%)

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