DRSC/TRiP Functional Genomics Resources

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Protein Alignment Whamy and viro-2

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_741212.2 Gene:viro-2 / 3565684 WormBaseID:WBGene00015107 Length:616 Species:Caenorhabditis elegans


Alignment Length:516 Identity:127/516 - (24%)
Similarity:204/516 - (39%) Gaps:117/516 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 SFATSVLVSSKGSK--YEISGPVNFQHVSG----DVTRD---RTRNAFDLNADPNDKVLRKYMME 230
            ||..::..|...||  .||..|.:|:||.|    ||..|   :.|:..::| :|.::.:.|.::.
 Worm   154 SFFHNLFKSHSESKNQVEIGAPTDFRHVDGVKLTDVQEDLYMQVRSKLNVN-NPEEEEIVKQVIV 217

  Fly   231 RGITEADISDMRRQE--VIKKIIHSNFTWMPPKSDL-QAQPKVQDHARPLLYATISTNNQITP-- 290
            |.......|.|.::|  .:|::...|......||.. :.:|||:|.::|::  .:.|.:.:.|  
 Worm   218 RNEDHIRQSLMVKKESQTVKEVKDKNKDKKKSKSFFGRNKPKVEDVSQPIV--PVITGDPLNPDW 280

  Fly   291 ---PPSPPPPPIATISRPTEAPNFSNYASLTSRFVDISDMDLPAPTPAAPT---------PFQPA 343
               ..|.......:.|..|.|.:|.:..:..:..:..:|.:.|.......|         .|:..
 Worm   281 TSNSTSSMSASFRSSSTVTAATSFKHSHTFAADPIKTTDWETPRKDTYGSTNQRQPQNIYKFEQE 345

  Fly   344 EVGSVIPVQVQPQQSVKPKVPP-----PPSAVMAK---NTHGYPAAIDIRQ--VRPSVAPKVANE 398
            .|.....::........|::|.     .|...|.:   :|...|...|..:  .:|...||    
 Worm   346 HVEQTYQIEKIEMDDTPPELPSRGASRNPEDQMTRGGLSTPRIPTHRDSYRWATKPDTVPK---- 406

  Fly   399 TYATISPQRKVGSMRVPPPAPPKPTIVPHTNSTISNGSLYAVSPVQYAPVAKPAPPAAPAKPTSR 463
                          :.|||.|..|:   |::..........|.|.....||.|.||:||  ||.:
 Worm   407 --------------QTPPPTPNAPS---HSHQVDQFAEFKLVEPKTPTRVAPPPPPSAP--PTIK 452

  Fly   464 SSAVYMTPLSAQKTQISSTPVPV---SPPPPTAASVGVPPPPPAP-PAGV---PPAPPPM-PVFG 520
                  .|:|...:..|:||...   :||||:.    :|.|.|:| ||.|   ||.|||: |:..
 Worm   453 ------FPISTGPSYSSTTPPTTPKPAPPPPSR----IPNPSPSPQPAEVSKSPPPPPPLPPIAT 507

  Fly   521 AGGAPPPPPPPSSGMAGVPPPPP---MQKSQPKAV--SAASTGGDPRDAFLESIR---QGVKLKK 577
            ....|||||||       |||||   .:.|.|..|  :|.......|.:.::.||   :...|:|
 Worm   508 PSSVPPPPPPP-------PPPPPALEQEISGPPTVRLTAVPESNSDRRSLMDQIRSTDRSQVLRK 565

  Fly   578 VDQKAATISGIKPRPERKPVTT---------DFLSELKLGITLRRVKNPADNPYSEESESQ 629
            |.....|...:       |.||         :||...:.||      ||:|:..|::.:.:
 Worm   566 VSDTPETRQSV-------PSTTSGTIVDQIQNFLDARRSGI------NPSDSEESDDDDDE 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 6/24 (25%)
viro-2NP_741212.2 PH-like 23..133 CDD:388408
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28919
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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