DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Whamy and wsp1

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_594758.1 Gene:wsp1 / 2543589 PomBaseID:SPAC4F10.15c Length:574 Species:Schizosaccharomyces pombe


Alignment Length:547 Identity:134/547 - (24%)
Similarity:187/547 - (34%) Gaps:170/547 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 LAGPSFATSV-------------------------LVSSKGSKYEISGPVNFQHVSG--DVTRDR 208
            |||.|||...                         .::.|||........|.|..|.  .|....
pombe   105 LAGFSFANETDAQKFYKKVLDKGCHPESIENPVLSFITRKGSSRHAPNNSNIQPPSAAPPVPGKE 169

  Fly   209 TRNAFDLNADPN--------DKVLRKYMMERGITEADISDMRRQEVIKKIIHSN-----FTWMPP 260
            ..||.. :..||        |..|...:|:.||::..|::  ..:.:|..::.:     .|..||
pombe   170 NYNAVG-SKSPNEPELLNSLDPSLIDSLMKMGISQDQIAE--NADFVKAYLNESAGTPTSTSAPP 231

  Fly   261 KSDLQAQPKVQDHARPLLYATISTNNQITPPPSP-PPPPIATISRPTEAPNFSNYASLTSRFVDI 324
                 ..|.:.....|....::|     .|.|.| |||...|:|.|..:|               
pombe   232 -----IPPSIPSSRPPERVPSLS-----APAPPPIPPPSNGTVSSPPNSP--------------- 271

  Fly   325 SDMDLPAPTPAAPTPFQPAEVGSVIPVQVQPQQSVKPKVPPPPSAVMAKNTHGYPAAIDIRQVRP 389
                   |.|.||....|| :.|          :.||.:|||.|.|.|       ||:...:.||
pombe   272 -------PRPIAPVSMNPA-INS----------TSKPPLPPPSSRVSA-------AALAANKKRP 311

  Fly   390 SVAPKVANETYATISPQRK------VG----SMRVPPPAPPKPTIVPHTNSTISNGSLYAVSPVQ 444
            ...|          .|.|:      :|    :..:|||.||     |.:|         |...:.
pombe   312 PPPP----------PPSRRNRGKPPIGNGSSNSSLPPPPPP-----PRSN---------AAGSIP 352

  Fly   445 YAPVAKPAPPAAPAK----------PTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTAASVGVP 499
            ..|..:.|||..|.:          |.|.|.||...|  |....|.....|..||...|:....|
pombe   353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP--APPPAIPGRSAPALPPLGNASRTSTP 415

  Fly   500 P-------PPPAPPAGVPPAPPPMPVFGAGGAPP-PP-----PPPSSGMAGVPPPPPMQKSQPKA 551
            |       ||.|||:..|.|||.:|: ||..||| ||     ||..:||...||.||...:.|.|
pombe   416 PVPTPPSLPPSAPPSLPPSAPPSLPM-GAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPA 479

  Fly   552 VSAASTG----------GDPRDAFLESIRQ--GVKLKKVDQKAATISGIKPR----PERKPVTTD 600
            .:.|...          .|.|...:.|||.  |:.|.|..:.:|:.|....:    |...|.:.:
pombe   480 PAPAPAAPVASIAELPQQDGRANLMASIRASGGMDLLKSRKVSASPSVASTKTSNPPVEAPPSNN 544

  Fly   601 FLSELKLGITLRRVKNPADNPYSEESE 627
            .:..|...:..|:.|....:...|:.:
pombe   545 LMDALASALNQRKTKVAQSDEEDEDDD 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 8/33 (24%)
wsp1NP_594758.1 EVH1_WASP-like 26..126 CDD:269916 6/20 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3671
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.860

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