DRSC/TRiP Functional Genomics Resources

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Protein Alignment Whamy and wsp-1

DIOPT Version :9

Sequence 1:NP_001036699.1 Gene:Whamy / 41198 FlyBaseID:FBgn0037750 Length:630 Species:Drosophila melanogaster
Sequence 2:NP_001379549.1 Gene:wsp-1 / 177616 WormBaseID:WBGene00006957 Length:781 Species:Caenorhabditis elegans


Alignment Length:690 Identity:159/690 - (23%)
Similarity:220/690 - (31%) Gaps:293/690 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EPVEFRQLEGNAIDFRKTFDLRGQGTDEMLQLYLRKANLSDDLERL-----PA------IVRRA- 63
            |||.    .|:.:..|..|:....|.::            ||.|.:     ||      :|.|: 
 Worm   240 EPVS----RGDYVSSRHVFNTDDFGDED------------DDYESVSMNPDPAPHSDSVLVHRSN 288

  Fly    64 -YVYDIIRSNKEPGYWVVISCSISSCQLHQPKVSLMLSTVVLNAAVFFSFQPPSMQVSSDVFAHP 127
             .|..::...:||.|     ||..|                 :::...|...|| .|.:|.   |
 Worm   289 GQVSVMVTKKEEPIY-----CSGGS-----------------DSSTESSSATPS-SVEADT---P 327

  Fly   128 PPAVRPPPHYADNVSINASLDGMKSSSSSNSLD-RYLGAPPS----------VALAGPSFA---- 177
            ||....||         |....:|.||||.|:. ..:|:.|:          ..:.||..|    
 Worm   328 PPIPSHPP---------ARHRLVKKSSSSTSISLNGIGSTPTRQFEITQAYGGTIRGPPMAIGGG 383

  Fly   178 ------------------TSVLVSSKGS-----------------KYEISGPVNFQ---HVSGDV 204
                              |....||.||                 |.:||.|.|||   ||..:.
 Worm   384 QGITQMGTMAAAPQSHTHTDGNASSSGSWFRKDKNKKKDKKSKIKKEDISNPTNFQHKAHVGWNQ 448

  Fly   205 TRDRTRNAFDLNADPNDKVLRKYMMERGITEADISDMRRQEVIKKIIHSNFTWMPPKSDLQAQPK 269
            ....:...:|   |..|:..:..:...|:...:::: ..::.:||.|                  
 Worm   449 DSGFSNTVYD---DDMDEATKNILKAAGLESNNLNE-DDKKFVKKFI------------------ 491

  Fly   270 VQDHARPLLYATISTNNQITPPPSPPPPPIATISRPTEAPNFSNYASLTSRFVDISDMDLPAPTP 334
                                                  |.|:..|.|:.|  :|.|.:..|.|. 
 Worm   492 --------------------------------------AKNYDKYVSVGS--LDPSQISSPLPP- 515

  Fly   335 AAPTPFQPAEVGSVIPVQVQPQQSVKPKVPPPPSAVMAKNTHGYPAAIDIRQVRPSVAPKVANET 399
                           |:|..||.:......|                  :||.:||         
 Worm   516 ---------------PIQQHPQMNQSWNQTP------------------VRQYKPS--------- 538

  Fly   400 YATISPQRKVGSMRVPPPAPPKPTIVPHTNSTISNGSLYAVSPVQYAPVAKPAPP-------AAP 457
            :.:.:|.....|....|.|||.||.|.      |:|         .||...|.||       .||
 Worm   539 FPSSAPIGSGASSYSTPAAPPPPTRVE------SHG---------LAPARPPPPPPSSGTRGIAP 588

  Fly   458 AKPTSRSSAVYMTPLSAQKTQISSTPVPVSPPPPTA------ASVGVPPPPPAPPAGVPPAPPPM 516
            ::|..::.. |.||    :.:..:.|.|..||||.:      :|...|||||.||.|       :
 Worm   589 SRPLPQAPN-YGTP----ENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMG-------L 641

  Fly   517 PVFGAGGAPPPPPPPSSGMAGVPPP-----PPMQKS-----------------QPKAVSAASTGG 559
            |..|||..|||||||.|| ||.|..     ||.|..                 |..|.|..|.||
 Worm   642 PAVGAGAPPPPPPPPPSG-AGGPASVLAKLPPAQDGRSNLLAEIQAGKQLRSVQQTADSPKSAGG 705

  Fly   560 DPRDAFLESIRQGVKLKKVDQKAATISGIKPRPERKPVTT 599
            |.|...:..||||.:||.||..|        ..||:..||
 Worm   706 DARGDVMAQIRQGAQLKHVDAAA--------EQERRKSTT 737

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WhamyNP_001036699.1 WH2 558..>580 CDD:280384 11/21 (52%)
wsp-1NP_001379549.1 PBD 432..494 CDD:395634 16/121 (13%)
WH2_Pan1-like 673..694 CDD:409213 1/20 (5%)
WH2_WAVE-2 705..733 CDD:409215 13/35 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001481
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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