DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8478 and Zfp322a

DIOPT Version :9

Sequence 1:NP_001163576.1 Gene:CG8478 / 41194 FlyBaseID:FBgn0037746 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001128556.1 Gene:Zfp322a / 680201 RGDID:1594230 Length:399 Species:Rattus norvegicus


Alignment Length:194 Identity:42/194 - (21%)
Similarity:55/194 - (28%) Gaps:65/194 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   374 EKVFSCKNCSTTFRVKSLLDVHMRMHDPVDNGANTLKRLNSNPVAAGVSKNRCKFCDKNFALERA 438
            ||.:.|..|..:|.....|..|.|.|                   ||.....|..|.|||.....
  Rat    95 EKPYKCSKCEKSFWHHLALSGHQRTH-------------------AGKKFYTCDICGKNFGQSSD 140

  Fly   439 LHIH----------LMQNCDKIPPSEKRKLEFTELNHEKKAQLPKIGGTSGINHPMT-MPQKP-- 490
            |.:|          |...|||.         |:.             .|:.|.|..| ..:||  
  Rat   141 LLVHQRSHTGEKPYLCNECDKC---------FSR-------------STNLIRHRRTHTGEKPFK 183

  Fly   491 ----QQRISTIPKLAPSQGTQS-MAPPSVKKIPKNVAHAGVY------RTPTKTVPCHICKQSF 543
                ::..|....|...|.|.: ..|....|..|:..|...:      .|..|...|..|::.|
  Rat   184 CLECEKAFSGKSDLISHQRTHTGERPYKCNKCEKSYRHRSAFIVHKRVHTGEKPYKCSACEKCF 247

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8478NP_001163576.1 zf-C2H2 377..399 CDD:278523 6/21 (29%)
C2H2 Zn finger 379..399 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..444 CDD:275368 7/27 (26%)
Zfp322aNP_001128556.1 COG5048 <68..218 CDD:227381 35/163 (21%)
C2H2 Zn finger 72..92 CDD:275368
C2H2 Zn finger 100..120 CDD:275368 6/19 (32%)
C2H2 Zn finger 128..148 CDD:275368 7/19 (37%)
zf-H2C2_2 140..165 CDD:290200 7/33 (21%)
C2H2 Zn finger 156..176 CDD:275368 7/41 (17%)
zf-H2C2_2 168..192 CDD:290200 5/23 (22%)
C2H2 Zn finger 184..204 CDD:275368 3/19 (16%)
C2H2 Zn finger 212..232 CDD:275368 3/19 (16%)
C2H2 Zn finger 240..260 CDD:275368 3/8 (38%)
C2H2 Zn finger 268..288 CDD:275368
C2H2 Zn finger 294..314 CDD:275368
C2H2 Zn finger 322..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.