DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8478 and CG7987

DIOPT Version :9

Sequence 1:NP_001163576.1 Gene:CG8478 / 41194 FlyBaseID:FBgn0037746 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_650375.1 Gene:CG7987 / 41768 FlyBaseID:FBgn0038244 Length:1283 Species:Drosophila melanogaster


Alignment Length:468 Identity:97/468 - (20%)
Similarity:162/468 - (34%) Gaps:120/468 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QQIDSRSSSIMTNDESVSMYLSFDAEDTLSNAKWQSALVTQNSQFLEVHNSKVEVNTDDKDLRRT 79
            ||.|........:|..|::: ..|            :||..|...|:..:|.|..|..:      
  Fly   852 QQSDRLWEEKFLHDSQVALF-QID------------SLVVVNDTHLQPASSAVSANIPN------ 897

  Fly    80 ILKDLHQLTIGEPDQNSPLRPFDKSI---LNRHNALCSTPSKGNISTETQTPQIMESIDLTQIDD 141
                    |.|...|...::.  ||:   .|.:::..::.:..:.||.|.:.:..:....|:...
  Fly   898 --------TRGGSKQQGKVQA--KSVEGAENLNSSATTSDTTFSASTSTASTRSRKRAATTKTAS 952

  Fly   142 K----ENTQP-----------EGCGGDNSTLSSSVDVTANTVKANTLKTGDATMDNVSLQEAAK- 190
            |    .|::|           :|.||| ||.||:....:.|..:.|      ...|:||.::.. 
  Fly   953 KAPPASNSRPRMIHTEKAKVTKGVGGD-STSSSAKKTRSKTYISRT------ESHNLSLDKSRSS 1010

  Fly   191 -----------TPA---PSQV--YPLSANVVLENITEVSNEGVSMLVSPAGAEKEVAHVN---EV 236
                       :||   |:|:  .||......|....|.......|:..|...:|..:..   .:
  Fly  1011 ASNMVDDYEIISPATHPPNQISSSPLHIKQEQEQQQRVQLMYDDNLLIDAALLREKTYEKFNPSI 1075

  Fly   237 VNEVSELIAKALKISADSVKPATSK---------------LKVE----------AGKKR--QSMS 274
            ||::.|::...||...:|....||:               :|:|          .|::|  ....
  Fly  1076 VNDLEEILRSPLKHERNSRLRFTSESSTTPQYLHEEEQNLIKIEPTSPDLREMLEGQQRVIAHSG 1140

  Fly   275 STYSGAALPRPRRSYLPTTTAETRTYSFKQRMSVVVKTTLNSP---ARKRSVGGGVSLSRRSC-- 334
            ||.|.::..|..| :|...||.......|:....|...|..||   |:|.:....||.|..|.  
  Fly  1141 STPSSSSSARTSR-HLRQITANGARAGSKRTTGGVASKTSASPGVVAKKSNTATKVSSSSSSSYL 1204

  Fly   335 ----------LPVSKLTKSSIRKSLAVTSVRSPEKIASKPAKTSTKSIPE---KVFSCKNCSTTF 386
                      :|.|...........:::.|.|....|...||.:.....|   :.|.|:.||..|
  Fly  1205 SYGVDSYNVNVPASANNGDVGSGFFSISEVVSAADAADAAAKAAAAGKSERKTRSFECEMCSAIF 1269

  Fly   387 RVKSLLDVHMRMH 399
            ..::.|..|:.:|
  Fly  1270 YDRTQLLEHVHIH 1282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8478NP_001163576.1 zf-C2H2 377..399 CDD:278523 7/21 (33%)
C2H2 Zn finger 379..399 CDD:275368 6/19 (32%)
C2H2 Zn finger 426..444 CDD:275368
CG7987NP_650375.1 C2H2 Zn finger 142..162 CDD:275368
C2H2 Zn finger 170..186 CDD:275368
COG5048 326..734 CDD:227381
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368
C2H2 Zn finger 424..444 CDD:275368
C2H2 Zn finger 476..496 CDD:275368
C2H2 Zn finger 504..523 CDD:275368
C2H2 Zn finger 534..554 CDD:275370
C2H2 Zn finger 562..582 CDD:275370
C2H2 Zn finger 589..609 CDD:275368
C2H2 Zn finger 620..640 CDD:275368
C2H2 Zn finger 648..668 CDD:275368
zf-H2C2_2 661..685 CDD:290200
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 709..726 CDD:275371
Hph 921..>1017 CDD:290417 20/102 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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