DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8478 and Opbp

DIOPT Version :9

Sequence 1:NP_001163576.1 Gene:CG8478 / 41194 FlyBaseID:FBgn0037746 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_724479.1 Gene:Opbp / 246618 FlyBaseID:FBgn0050443 Length:562 Species:Drosophila melanogaster


Alignment Length:352 Identity:79/352 - (22%)
Similarity:133/352 - (37%) Gaps:84/352 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 GAEKEVAHVNEVVNE-VSELIAKALKISAD-----SVKPATSKLKVEAGKKRQSMSSTYSGAALP 283
            ||..|:..:.||..: :||.:.:...:.||     .|:...:.:|.|..:...|.|..|.     
  Fly    59 GASGELDFIEEVAEDCISEEVGEEDIVYADVPLWELVEEVPANVKAEKDQNEPSNSDRYF----- 118

  Fly   284 RPRRSYLPTTTAETRTYSFKQRMSVVVKTTLNSPARKRSVGGGVSLSRRSCLPVSKLTKSSIRKS 348
                .|...:..|.|.   |....:.          .|:..||.|.....       .|:.:|:.
  Fly   119 ----CYDCHSIFENRN---KAEEHIC----------PRAESGGSSQQDGD-------AKAPVRRK 159

  Fly   349 LAVTSVRSPEKIASKPAKTSTKSIPEKVFSCKNCSTTFRVKSLLDVHMRMHDPVDNGANTLKRLN 413
            ||..|.|:..:.||            .|.||..|:|.|..:..|..|||:|:  :....:::  :
  Fly   160 LASVSARTGPRDAS------------SVISCGICNTVFSSEKFLKFHMRIHE--NRAPKSIQ--D 208

  Fly   414 SNPVAA-----GVSKNRCKFCDKNFALERALHIHL---MQNCDKIPPS---EKRKLEFTELNHEK 467
            :.|:.|     .:.:..|:.|:|:|. |..|.:|.   .|...:|..|   .|.:.|.|...|:|
  Fly   209 ALPIGAHQQYSELDQFYCEICNKSFD-ETLLTVHKQMHQQESSEIMCSICNRKFENEVTYQMHQK 272

  Fly   468 KAQLPKIGGTSGINHPMTMPQKPQQRISTIPKLA--PSQGTQSMAPPSVKKIPKNVAHAGVYRTP 530
            ..:.|:...:|         :|..||.|...:..  |.|..:.:.....:|:.....|.|     
  Fly   273 IHEKPRDSESS---------RKLAQRTSLDKEKPGFPCQYCERVFTRPFEKVKHERVHTG----- 323

  Fly   531 TKTVPCHICKQSFRSILEFTNHSLTVH 557
            .|...|.:|.::||     .::|||:|
  Fly   324 EKPYACEVCGKTFR-----VSYSLTLH 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8478NP_001163576.1 zf-C2H2 377..399 CDD:278523 9/21 (43%)
C2H2 Zn finger 379..399 CDD:275368 8/19 (42%)
C2H2 Zn finger 426..444 CDD:275368 7/20 (35%)
OpbpNP_724479.1 C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
C2H2 Zn finger 301..321 CDD:275368 2/19 (11%)
zf-H2C2_2 316..336 CDD:290200 5/24 (21%)
C2H2 Zn finger 329..349 CDD:275368 8/22 (36%)
zf-H2C2_2 341..366 CDD:290200 4/5 (80%)
C2H2 Zn finger 357..377 CDD:275368
C2H2 Zn finger 385..405 CDD:275368
C2H2 Zn finger 411..431 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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