DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8478 and Zfp30

DIOPT Version :9

Sequence 1:NP_001163576.1 Gene:CG8478 / 41194 FlyBaseID:FBgn0037746 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001347136.1 Gene:Zfp30 / 22693 MGIID:99178 Length:566 Species:Mus musculus


Alignment Length:540 Identity:116/540 - (21%)
Similarity:176/540 - (32%) Gaps:185/540 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 STLSSSV------DVTANTVKANTLKTGDATMDNVSLQEAAKTPAPSQVYPLSA-------NVVL 206
            |..|||:      |:.....:|::..:|......|..::.|...:..:...|||       :|:|
Mouse     5 SPSSSSLCERLHQDMILEEEQASSCDSGIMAHSTVMFRDVAVGFSQEEWECLSAYERDLYRDVML 69

  Fly   207 ENITEVSNEGVSMLVSPAGAEKEVAHVNEVVNEVSELIAKALKISADSVKPATSKLKVEAGKKRQ 271
            ||        .|.|||.||.......|..::.:..|                 ..:.|.|.|:|.
Mouse    70 EN--------YSHLVSLAGCSISKPDVITLLEQGKE-----------------PWMIVRAEKRRW 109

  Fly   272 S--MSSTYSGAALPRPRRSYL----------------PTTTAETRTYSFK----QRMS------V 308
            |  :.|.||...|...:.:|.                |..:...:.:.:|    |..|      .
Mouse   110 SRDLESRYSSNGLLPEKNTYEINLSPWEIMGRIQRRGPEDSLLGKDFEYKIYEEQENSHRVYFRH 174

  Fly   309 VVKTTLNSPA--RKRSVGGGVSLSRRS--------CLPVSKLTKSSIRKSLAV------------ 351
            |:|||.....  |||:   .|||.:::        |....|..|  :|:.|..            
Mouse   175 VIKTTSGKRPRYRKRT---PVSLYQKTPNGEKPYECGECGKAFK--VRQQLTFHQRIHTGEKPYE 234

  Fly   352 -----------------TSVRSPEKI--ASKPAKTSTKS----------IPEKVFSCKNCSTTFR 387
                             ..:.:.:|:  ..|.||..|.|          :.||.:.||.|...||
Mouse   235 CKECGKAFRQCAHLSRHQRIHASDKLYECKKCAKIFTCSSDLRGHQRSHVGEKPYDCKECGKAFR 299

  Fly   388 VKSLLDVHMRMHDPVDNGANT--------------LKRLNSNPVAAGVSKNRCKFCDKNFALERA 438
            |:..|.:|.|:|......|.|              .:||||     |.|::.||.|.:.|.....
Mouse   300 VRGQLMLHQRIHTGEKPYACTECGKSFRQVAHLTRHQRLNS-----GSSRHECKECGRAFLCSTG 359

  Fly   439 LHIHLMQNCDKIPPSEK--------------RKLEFTELNH--EKKAQLPKIGGTSGINHPMTMP 487
            |.:|     .|:...||              ::|...|..|  ||.....:.|.|....:.:|: 
Mouse   360 LRLH-----HKLHTGEKPYDCKECGKAFRVRQQLTLHERIHTGEKPFDCKECGKTFSRGYHLTL- 418

  Fly   488 QKPQQRISTIPKLAPSQGTQSMAPPSVKKIPK-------NVAHAGVYRTPTKTVPCHICKQSFRS 545
               .|||.|..|           |...|:..|       .::|.|:: ...|...|..|.::||.
Mouse   419 ---HQRIHTGEK-----------PYECKECRKFFRRYSELISHQGIH-IGEKPYDCKECGKAFRL 468

  Fly   546 ILEFTNHSLTVHGNNQLKKM 565
            ..:.|.|.....|....|.|
Mouse   469 FSQLTQHQSIHFGEKPYKCM 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8478NP_001163576.1 zf-C2H2 377..399 CDD:278523 9/21 (43%)
C2H2 Zn finger 379..399 CDD:275368 9/19 (47%)
C2H2 Zn finger 426..444 CDD:275368 6/17 (35%)
Zfp30NP_001347136.1 KRAB 39..100 CDD:214630 17/85 (20%)
COG5048 196..556 CDD:227381 68/321 (21%)
C2H2 Zn finger 207..227 CDD:275368 5/21 (24%)
C2H2 Zn finger 235..255 CDD:275368 0/19 (0%)
C2H2 Zn finger 263..283 CDD:275368 5/19 (26%)
C2H2 Zn finger 291..311 CDD:275368 9/19 (47%)
C2H2 Zn finger 319..338 CDD:275368 1/18 (6%)
C2H2 Zn finger 347..367 CDD:275368 7/24 (29%)
C2H2 Zn finger 375..395 CDD:275368 2/19 (11%)
C2H2 Zn finger 403..423 CDD:275368 5/23 (22%)
C2H2 Zn finger 431..451 CDD:275368 4/19 (21%)
C2H2 Zn finger 459..479 CDD:275368 6/19 (32%)
C2H2 Zn finger 487..507 CDD:275368 1/2 (50%)
C2H2 Zn finger 515..535 CDD:275368
C2H2 Zn finger 543..563 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S12625
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.860

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