DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8478 and Zbtb17

DIOPT Version :9

Sequence 1:NP_001163576.1 Gene:CG8478 / 41194 FlyBaseID:FBgn0037746 Length:576 Species:Drosophila melanogaster
Sequence 2:NP_001365755.1 Gene:Zbtb17 / 22642 MGIID:107410 Length:819 Species:Mus musculus


Alignment Length:383 Identity:87/383 - (22%)
Similarity:135/383 - (35%) Gaps:116/383 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 LTQIDDKENTQPEGCG-------GDNSTLSSSVDVTANTVKANTLKTGD----ATMDNVSLQEAA 189
            |:::|....:...|.|       |..:..:||..|.|  ::.:.|.:|.    |:..:...::..
Mouse   147 LSRLDQARGSSSTGPGRELKEERGGQAESASSGPVPA--MEESPLASGQSPNPASRPSSGAEQTE 209

  Fly   190 KTPAPSQVYPLS---------ANVVLENITEVSNEGVSMLVSPA-----GAEKEVAHVNEVVNEV 240
            |..||.:..|:.         |....|.::|.|.:  .|.|.||     |.|:|.|....|..|.
Mouse   210 KADAPREPPPVELKPDPTSSMAAAEAEALSESSEQ--EMEVEPASKGEDGQEEEGAGPATVKEEG 272

  Fly   241 SELIAKALKISADSVKPATSKLKVEAGKKRQSMSSTYSGAALPRPRRSYLPTTTAETRTYSFKQR 305
            ..|         |:.:|.         ::.:..:.|.||..|....:: |.:.|...||.| |..
Mouse   273 MHL---------DNGEPP---------EENEESAGTDSGQELGMEGQN-LRSGTYGDRTES-KAY 317

  Fly   306 MSVVVKT---------TLNSPARKRSVGGGVSLSRRSCLPVSKLTKSSIRKSLAVTSVRSPEKIA 361
            .|::.|.         |.|.....|...|....|.|.|                       .|..
Mouse   318 GSIIHKCEDCGKEFTHTGNFKRHIRIHTGEKPFSCREC-----------------------SKAF 359

  Fly   362 SKPA--KTSTKS-IPEKVFSCKNCSTTFRVKSLLDVHMRMHDPVDNGANTLKRLNSNPVAAGVSK 423
            |.||  |...|: .|.|.:.|:.|..::|:.|||::|.:.|                   :|.::
Mouse   360 SDPAACKAHEKTHSPLKPYGCEECGKSYRLISLLNLHKKRH-------------------SGEAR 405

  Fly   424 NRCKFCDKNFA----LERALHIHLMQ---NCD------KIPPSEKRKLEFTELNHEKK 468
            .||..|.|.|.    |:|...:|..|   .||      ..|.|:.|.||..:.:.|.|
Mouse   406 YRCGDCGKLFTTSGNLKRHQLVHSGQKPYQCDYCGRSFSDPTSKMRHLETHDTDKEHK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8478NP_001163576.1 zf-C2H2 377..399 CDD:278523 7/21 (33%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..444 CDD:275368 7/21 (33%)
Zbtb17NP_001365755.1 BTB_POZ_ZBTB17_MIZ1 2..113 CDD:349515
PRK07003 <115..>266 CDD:235906 28/122 (23%)
COG5048 322..653 CDD:227381 43/184 (23%)
C2H2 Zn finger 324..344 CDD:275368 3/19 (16%)
C2H2 Zn finger 352..372 CDD:275368 8/42 (19%)
C2H2 Zn finger 380..400 CDD:275368 7/19 (37%)
C2H2 Zn finger 408..428 CDD:275368 6/19 (32%)
C2H2 Zn finger 436..456 CDD:275368 7/19 (37%)
C2H2 Zn finger 464..484 CDD:275368 87/383 (23%)
C2H2 Zn finger 492..512 CDD:275368
C2H2 Zn finger 520..540 CDD:275368
C2H2 Zn finger 548..568 CDD:275368
C2H2 Zn finger 576..596 CDD:275368
C2H2 Zn finger 604..624 CDD:275368
C2H2 Zn finger 632..651 CDD:275370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.