DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap24 and snap29

DIOPT Version :9

Sequence 1:NP_524298.1 Gene:Snap24 / 41193 FlyBaseID:FBgn0266720 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_988988.1 Gene:snap29 / 394585 XenbaseID:XB-GENE-941286 Length:257 Species:Xenopus tropicalis


Alignment Length:219 Identity:55/219 - (25%)
Similarity:108/219 - (49%) Gaps:25/219 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EPRTELQELQFKSGQVADESLESTRRMLALMDESKEAGIRTLVALDDQGEQLDRIEEGMDRINAD 72
            |...:.:.||.:..:.|:..::|:.|.|:|:.:|::.|:.|...|..|||.|.|.|..:|::..|
 Frog    38 EAADKQRSLQQEVTRRAESMVDSSNRSLSLVYDSEKIGVDTAEELVRQGEALKRTERMVDKMEQD 102

  Fly    73 MREAEKNLSGMEKC-CGIC---------------VLPWKKVNIKDDGESAWKANDDGKIVASQPQ 121
            |:.::|:::.::.. .|..               ...:|.....::..|:.||.:| |..|:.|.
 Frog   103 MKTSQKHINSIKSMFSGFTNYFRSKPAETPPENGASEYKSSTKLEEALSSSKAQED-KYQATHPN 166

  Fly   122 RVIDE--RERGGMGAPPQSGYVAR---ITNDAREDEMDENLGQVNSMLGNLRNMALDMGSELENQ 181
            .:..|  .....||| ..|||..:   :.|  ...::|.||..::..||.|:|:||.:.:|:::|
 Frog   167 LLKRETLESSNNMGA-SSSGYQHKNQVLRN--YHQKVDSNLDDMSLGLGRLKNLALGLQTEIDDQ 228

  Fly   182 NKQVDRINAKGDANNIRMDGVNKR 205
            ::.:.|:..|.|..::.:...:||
 Frog   229 DEMLGRLTGKVDKMDLNIKTTDKR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap24NP_524298.1 SNARE_SNAP25N_23N 18..82 CDD:277242 19/63 (30%)
SNAP-25 93..148 CDD:395673 16/59 (27%)
SNARE_SNAP25C 150..208 CDD:277238 16/56 (29%)
snap29NP_988988.1 SNARE_SNAP29N 48..112 CDD:277240 19/63 (30%)
SNARE_SNAP29C 197..254 CDD:277209 16/56 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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