DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snap24 and Snap23

DIOPT Version :9

Sequence 1:NP_524298.1 Gene:Snap24 / 41193 FlyBaseID:FBgn0266720 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001171263.1 Gene:Snap23 / 20619 MGIID:109356 Length:221 Species:Mus musculus


Alignment Length:226 Identity:108/226 - (47%)
Similarity:149/226 - (65%) Gaps:22/226 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VENAEPRTELQELQFKSGQVADESLESTRRMLALMDESKEAGIRTLVALDDQGEQLDRIEEGMDR 68
            ::|..|    :|:|.::.||.|||||||||:|.|..||::|||:|:..||:|||||:|||||||:
Mouse     1 MDNLSP----EEVQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMDQ 61

  Fly    69 INADMREAEKNLSGMEKCCGICVLPWKKVNIKD----------DGESAWKA-------NDDGKIV 116
            ||.|||||||.|:.:.||||:|:.|..:.::.|          :....:||       |....:|
Mouse    62 INKDMREAEKTLTELNKCCGLCICPCNRFSVGDCFFETRTKNFESGKNYKATWGDGGDNSPSNVV 126

  Fly   117 ASQPQRVIDERERGGMGAPPQSGYVARITNDAREDEMDENLGQVNSMLGNLRNMALDMGSELENQ 181
            :.||.|:.:.:.:...|| ...||:.|||||||||||:|||.||.|:||||:|||||||:|::.|
Mouse   127 SKQPSRITNGQPQQTTGA-ASGGYIKRITNDAREDEMEENLTQVGSILGNLKNMALDMGNEIDAQ 190

  Fly   182 NKQVDRINAKGDANNIRMDGVNKRANNLLKS 212
            |:|:.:|..|.|.|..|:|..|.||..|:.|
Mouse   191 NQQIQKITEKADTNKNRIDIANTRAKKLIDS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap24NP_524298.1 SNARE_SNAP25N_23N 18..82 CDD:277242 43/63 (68%)
SNAP-25 93..148 CDD:395673 17/71 (24%)
SNARE_SNAP25C 150..208 CDD:277238 34/57 (60%)
Snap23NP_001171263.1 SNARE_SNAP23N 9..75 CDD:277248 44/65 (68%)
SNAP-25 100..157 CDD:366328 15/57 (26%)
SNARE_SNAP23C 159..217 CDD:277237 34/57 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847097
Domainoid 1 1.000 81 1.000 Domainoid score I8480
eggNOG 1 0.900 - - E1_KOG3065
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60093
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000822
OrthoInspector 1 1.000 - - mtm8842
orthoMCL 1 0.900 - - OOG6_102919
Panther 1 1.100 - - O PTHR19305
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1125
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.710

Return to query results.
Submit another query.