DRSC/TRiP Functional Genomics Resources

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Protein Alignment Snap24 and Snap23

DIOPT Version :10

Sequence 1:NP_524298.1 Gene:Snap24 / 41193 FlyBaseID:FBgn0266720 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001171263.1 Gene:Snap23 / 20619 MGIID:109356 Length:221 Species:Mus musculus


Alignment Length:226 Identity:108/226 - (47%)
Similarity:149/226 - (65%) Gaps:22/226 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VENAEPRTELQELQFKSGQVADESLESTRRMLALMDESKEAGIRTLVALDDQGEQLDRIEEGMDR 68
            ::|..|    :|:|.::.||.|||||||||:|.|..||::|||:|:..||:|||||:|||||||:
Mouse     1 MDNLSP----EEVQLRAHQVTDESLESTRRILGLAIESQDAGIKTITMLDEQGEQLNRIEEGMDQ 61

  Fly    69 INADMREAEKNLSGMEKCCGICVLPWKKVNIKD----------DGESAWKA-------NDDGKIV 116
            ||.|||||||.|:.:.||||:|:.|..:.::.|          :....:||       |....:|
Mouse    62 INKDMREAEKTLTELNKCCGLCICPCNRFSVGDCFFETRTKNFESGKNYKATWGDGGDNSPSNVV 126

  Fly   117 ASQPQRVIDERERGGMGAPPQSGYVARITNDAREDEMDENLGQVNSMLGNLRNMALDMGSELENQ 181
            :.||.|:.:.:.:...|| ...||:.|||||||||||:|||.||.|:||||:|||||||:|::.|
Mouse   127 SKQPSRITNGQPQQTTGA-ASGGYIKRITNDAREDEMEENLTQVGSILGNLKNMALDMGNEIDAQ 190

  Fly   182 NKQVDRINAKGDANNIRMDGVNKRANNLLKS 212
            |:|:.:|..|.|.|..|:|..|.||..|:.|
Mouse   191 NQQIQKITEKADTNKNRIDIANTRAKKLIDS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap24NP_524298.1 SNARE_SNAP25N_23N 18..82 CDD:277242 43/63 (68%)
SNAP-25 93..149 CDD:459955 18/72 (25%)
SNARE_SNAP25C 150..208 CDD:277238 34/57 (60%)
Snap23NP_001171263.1 SNARE_SNAP23N 9..75 CDD:277248 44/65 (68%)
SNAP-25 100..158 CDD:459955 16/58 (28%)
SNARE_SNAP23C 159..217 CDD:277237 34/57 (60%)

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