DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Snap24 and snap23

DIOPT Version :9

Sequence 1:NP_524298.1 Gene:Snap24 / 41193 FlyBaseID:FBgn0266720 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001107340.1 Gene:snap23 / 100135161 XenbaseID:XB-GENE-942565 Length:205 Species:Xenopus tropicalis


Alignment Length:204 Identity:111/204 - (54%)
Similarity:144/204 - (70%) Gaps:11/204 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QELQFKSGQVADESLESTRRMLALMDESKEAGIRTLVALDDQGEQLDRIEEGMDRINADMREAEK 78
            :|:|.|:.||.|:|||||||||.|..||::.||:|:..||:|||||:|||||||:||.|||||||
 Frog     7 EEIQLKANQVTDDSLESTRRMLNLALESQDTGIKTITMLDEQGEQLNRIEEGMDQINKDMREAEK 71

  Fly    79 NLSGMEKCCGICVLPWKKVNIKDDGES---AW--KANDDGKIVASQPQRVIDERERGGMGAPPQS 138
            ||:.:.||||:||.|.|:....:.||:   .|  |.||...:::.||.:.     .|..|...||
 Frog    72 NLTELNKCCGLCVCPGKRPKDFESGENYKKTWGSKDNDSENVISKQPHQT-----NGQQGGVAQS 131

  Fly   139 G-YVARITNDAREDEMDENLGQVNSMLGNLRNMALDMGSELENQNKQVDRINAKGDANNIRMDGV 202
            | |:.|||.|.|||||||||.||.|:||||:|||:|||:|||:.|:|:||||.|.:.|..|:|..
 Frog   132 GPYIKRITGDDREDEMDENLTQVGSILGNLKNMAIDMGNELESHNQQIDRINEKAETNKTRIDEA 196

  Fly   203 NKRANNLLK 211
            |.||..|::
 Frog   197 NTRAKKLIE 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Snap24NP_524298.1 SNARE_SNAP25N_23N 18..82 CDD:277242 44/63 (70%)
SNAP-25 93..148 CDD:395673 19/60 (32%)
SNARE_SNAP25C 150..208 CDD:277238 37/57 (65%)
snap23NP_001107340.1 SNARE 9..75 CDD:389950 45/65 (69%)
SNAP-25 86..141 CDD:366328 19/59 (32%)
SNARE_SNAP23C 144..202 CDD:277237 37/57 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 85 1.000 Domainoid score I8064
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D495812at33208
OrthoFinder 1 1.000 - - FOG0000822
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19305
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1125
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.110

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