DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8412 and Alg12

DIOPT Version :9

Sequence 1:NP_649939.1 Gene:CG8412 / 41191 FlyBaseID:FBgn0037743 Length:678 Species:Drosophila melanogaster
Sequence 2:NP_001135829.1 Gene:Alg12 / 223774 MGIID:2385025 Length:486 Species:Mus musculus


Alignment Length:485 Identity:230/485 - (47%)
Similarity:320/485 - (65%) Gaps:22/485 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LIFVTAAAHLVYTPFTKVEESFNLQAMHDILYLRNNFTQYDHHDYPGVVPRTFIGPLVVSIISAP 68
            |:...|..|||..|:|||||||||||.||:||.:.:..:||||::||||||||:||||::..|:|
Mouse    17 LLVTVATIHLVICPYTKVEESFNLQATHDLLYHQLDIDKYDHHEFPGVVPRTFLGPLVIAAFSSP 81

  Fly    69 FVLLFETLSINKFWAQYVVRLVLA-GAISVAWNSLRQAVTKIYGVEVRLWFTAITITQFHFMFYM 132
            .|.:...|.::||::|.:||.||. |.||..| :|::.|.:.:|..|.:.|..|:.||||.|||.
Mouse    82 VVYVLSLLEVSKFYSQLIVRGVLGLGVISGLW-TLQKEVRQQFGATVAVMFCWISATQFHLMFYC 145

  Fly   133 TRPLPNIFALPIVLFAIAYWLRDQHKPFIICSGISILVFRSELALFLGILLVVSLLRRKVSIDGL 197
            ||.|||:.||.:||.|:..||:.:...|:..|...|:.||:|||:.|||.|:::|.:|::::..:
Mouse   146 TRTLPNVLALAVVLPALTAWLQRRWALFVWLSAFVIIGFRAELAMLLGIALLLTLYQRRLTVARV 210

  Fly   198 LKVALPAGVCILAATVLVDSFFWRRLLWPEGEVLWYNTVLNKSSNWGTSPFLWYFYSALPRAMGA 262
            |:.|:|||:..|..||.|||:|||.|:||||.||||||||||||||||||.||||||||||.:|.
Mouse   211 LRHAIPAGLLCLGLTVAVDSYFWRYLVWPEGVVLWYNTVLNKSSNWGTSPLLWYFYSALPRGLGC 275

  Fly   263 SLVLVPIGVALEPRIRPLVLSALLFVLLYSILPHKELRFIIYVFPVLNIAAACACQRIWMNSAKS 327
            ||:.:|:| |::.|...|.|.:|.||.|||:|||||||||||.||||||.||..|..| :|  |.
Mouse   276 SLLFIPLG-AVDRRTYALALPSLGFVALYSLLPHKELRFIIYTFPVLNIMAARGCTYI-LN--KK 336

  Fly   328 TW-HSFLALACGAHLLLNVFITLFLLVISGTNYPGGAALSRLHRLEAGTSNVSVHISNLAAQSGV 391
            :| :...|:....|:|:||..|...|.:|..|||||.|:.:||.|....::|.:||...|||:||
Mouse   337 SWPYKVRAMLVTGHILVNVAYTATSLYVSHFNYPGGVAMQQLHELVPPQTDVLLHIDVAAAQTGV 401

  Fly   392 SRFMEINNEWTYSKDETMNYTQADLVAYTHLLVEAKNKQNTELWASLQNEFDTLEFIDCFNSIGI 456
            |||:::|::|.|.|.|.:.  .|.::.|||:|:||. ..:..|:........::|     .:.||
Mouse   402 SRFLQVNDDWRYDKSEDVG--AAAMLNYTHILMEAV-PGHPALYRDTHRVLASIE-----GTTGI 458

  Fly   457 QYNSL-LP---VRIKTKPCIGILKKRPVAP 482
            ..|.: ||   |.::||.   :|.:|.:.|
Mouse   459 SLNLMKLPPFDVNLQTKL---VLLERLLRP 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8412NP_649939.1 PMT_2 3..351 CDD:304453 183/348 (53%)
Alg12NP_001135829.1 PMT_2 17..405 CDD:389829 204/392 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846996
Domainoid 1 1.000 373 1.000 Domainoid score I887
eggNOG 1 0.900 - - E1_KOG2516
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H36269
Inparanoid 1 1.050 419 1.000 Inparanoid score I1784
Isobase 1 0.950 - 0 Normalized mean entropy S1928
OMA 1 1.010 - - QHG55263
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004217
OrthoInspector 1 1.000 - - oto93736
orthoMCL 1 0.900 - - OOG6_104021
Panther 1 1.100 - - LDO PTHR22760
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2394
SonicParanoid 1 1.000 - - X3480
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

Return to query results.
Submit another query.