Protein Alignment Rpt3R and RPT1A

DIOPT Version :10

• Sequence 1: NP_649938.2
• Gene: Rpt3R / 41190
• FlyBaseID: FBgn0037742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_175778.1
• Gene: RPT1A / 841812
• AraportID: AT1G53750
• Length: 426
• Species: Arabidopsis thaliana
• Alignment Length: 412
• Identity: 172/412 - (41%)
• Similarity: 244/412 - (59%)
• Gaps: 56/412 - (13%)

  Fly    15 SLEKYDGLDPHDLYVLYKKLQMEL-ELIQVQEDY--IKEEQRNL----------KKEFIHAQEEV 66
            :|.|..||.|:...:  ||::.|: :|.:...|.  |||....|          .|:.:  |||
plant    24 ALLKTYGLGPYSAPI--KKVEKEIKDLAKKINDLCGIKESDTGLAPPSQWDLVSDKQMM--QEE- 83

  Fly    67 KRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRV-------------LSTIDREQLKPSSSVG 118
                 .||.:.:..:.:..|      |..:.|.:.|             :|..|.|:   ...||
plant    84 -----QPLQVARCTKIISPN------TEDAKYVINVKQIAKFVVGLGDKVSPTDIEE---GMRVG 134

  Fly   119 LHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGI 183
            :.:....:...:||:.|.:::|::.:||||::|:|:||...|.:::||.||||:.|.:.:.::||
plant   135 VDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGI 199

  Fly   184 DPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSI 248
            |||:|||.:||||.|||:||:|||:.|.|.||||:|||.||||:|||.||||:||::|:.....|
plant   200 DPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACI 264

  Fly   249 IFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGR 313
            :|.||:|||...|||...|.|.||||.:||::||:||||...||||:|||||.||||||||||||
plant   265 VFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGR 329

  Fly   314 LDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIAR--PDKISNADINAICQEAGMHAVRE 376
            ||||:|..|||...:..:|...|..||...|:..| ::||  |:. :.|||.::|.||||:|:|.
plant   330 LDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFE-LLARLCPNS-TGADIRSVCTEAGMYAIRA 392

  Fly   377 NRYVVNAKDF-------EKGYK 391
            .|..|..|||       .|||:
plant   393 RRKTVTEKDFLDAVNKVIKGYQ 414

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3R	NP_649938.2	PTZ00454	20..405	CDD:240423	170/407 (42%)
RPT1A	NP_175778.1	PRK03992	113..423	CDD:179699	148/307 (48%)