Protein Alignment Rpt3R and psmc3

DIOPT Version :10

• Sequence 1: NP_649938.2
• Gene: Rpt3R / 41190
• FlyBaseID: FBgn0037742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001006786.1
• Gene: psmc3 / 448481
• XenbaseID: XB-GENE-1009848
• Length: 423
• Species: Xenopus tropicalis
• Alignment Length: 422
• Identity: 164/422 - (38%)
• Similarity: 251/422 - (59%)
• Gaps: 31/422 - (7%)

  Fly     4 LKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKR 68
            |.||:.:...:.:.:...|...::.::..::......:|...|.|||.           .|::|.
 Frog    13 LGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKEN-----------SEKIKV 66

  Fly    69 IKAVPLVIGQFLEAVD------ENNG--------------IVASTTGSNYYVRVLSTIDREQLKP 113
            .|.:|.::...:|.:|      |.:|              ::.::|...|::.|:..:|.|:|||
 Frog    67 NKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKP 131

  Fly   114 SSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLY 178
            ...||::|.|..:::.:|.|.||.:..:..||:|...||||||||.|.||:.||:.||:.|.:.:
 Frog   132 GDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKF 196

  Fly   179 KQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQ 243
            :.:||.||:|||::||||.|||:||:|.|..|.|:|:::.|.:.||.::|:|.::|||.|.|||:
 Frog   197 ENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKE 261

  Fly   244 NSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPAL 308
            .:||||||||:|||.|||||::...||||||.:||||||:|||...|.:|||.||||.|.|||||
 Frog   262 KAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPAL 326

  Fly   309 LRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHA 373
            ||.||||||||.|:|:...:..:....:.||||..||:.|::....|..:.|...|:|.||||.|
 Frog   327 LRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIA 391

  Fly   374 VRENRYVVNAKDFEKGYKTSVRKDEAQHEFYS 405
            :|.....:..:|:.:|......|.:|..::|:
 Frog   392 LRRGATELTHEDYMEGILEVQAKKKANLQYYA 423

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3R	NP_649938.2	PTZ00454	20..405	CDD:240423	160/404 (40%)
psmc3	NP_001006786.1	PRK03992	23..416	CDD:179699	159/403 (39%)