DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3R and psmc5

DIOPT Version :10

Sequence 1:NP_649938.2 Gene:Rpt3R / 41190 FlyBaseID:FBgn0037742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_001003740.1 Gene:psmc5 / 445285 ZFINID:ZDB-GENE-030131-6547 Length:406 Species:Danio rerio


Alignment Length:405 Identity:165/405 - (40%)
Similarity:246/405 - (60%) Gaps:33/405 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 DGLDPHDL-----------YVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQ---------- 63
            ||::..|:           |.|.|..:::|.        :.|:.:||::  :.||          
Zfish     4 DGIEQMDIEDSKGGSGLRQYYLSKIEELQLT--------VNEKSQNLRR--LQAQRNELNAKVRL 58

  Fly    64 --EEVKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCL 126
              ||::.::.....:|:.:.|:|:...:|.......:.|.|...||...:.|:..|.|...|..|
Zfish    59 LREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTL 123

  Fly   127 VDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLL 191
            ..::|.:.|..:|::..::.||.:|..|||||.|.:||:|.:|||:.|.:|::.:||..|:||||
Zfish   124 HKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLL 188

  Fly   192 FGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDA 256
            :||||.|||:||:||||||..:||||.|||.|||::|||.||||:||.:|::::|||||:||||:
Zfish   189 YGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDS 253

  Fly   257 IATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELP 321
            |.:.|.:..:|.|.||||.:||||||:|||:.|.||||||||||.|.||.|||||||:|||||.|
Zfish   254 IGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFP 318

  Fly   322 LPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDF 386
            .|:...:..:....:.|||:...::|..|.......|.|::..:|.||||:|:||.|..|..:||
Zfish   319 PPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDF 383

  Fly   387 EKGYKTSVRKDEAQH 401
            |......::||..::
Zfish   384 EMAVAKVMQKDSEKN 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3RNP_649938.2 PTZ00454 20..405 CDD:240423 165/405 (41%)
psmc5NP_001003740.1 PRK03992 24..400 CDD:179699 161/385 (42%)

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