DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3R and Rpt5

DIOPT Version :10

Sequence 1:NP_649938.2 Gene:Rpt3R / 41190 FlyBaseID:FBgn0037742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_524464.1 Gene:Rpt5 / 42805 FlyBaseID:FBgn0028684 Length:428 Species:Drosophila melanogaster


Alignment Length:422 Identity:167/422 - (39%)
Similarity:251/422 - (59%) Gaps:31/422 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKR 68
            |.||:.:.....:.....|..:::.::..::......||.|.:.||:.           .|::|.
  Fly    18 LGEEVMRMSTDEIVSRTRLMDNEIKIMKSEVIRITHEIQAQNEKIKDN-----------TEKIKV 71

  Fly    69 IKAVPLVIGQFLEAVD------ENNG--------------IVASTTGSNYYVRVLSTIDREQLKP 113
            .|.:|.::...:|.:|      |::|              ::.::|...|::.|:..:|.|:|||
  Fly    72 NKTLPYLVSNVIELLDVDPQEEEDDGSVTVLDNQRKGKCAVIKTSTRQAYFLPVIGLVDAEKLKP 136

  Fly   114 SSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLY 178
            ...||::|.|..:::.:|.|.|:.:..:..||:|...||||||||.|.||:.|||.||:||.:.:
  Fly   137 GDLVGVNKDSYLILETLPAEYDARVKAMEVDERPTEQYSDIGGLDKQIQELIEAVVLPMTHKEKF 201

  Fly   179 KQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQ 243
            |.:||.||:||||:||||.|||:||:|.|..|.::|:::.|.:.||.::|:|.::|||.|.|||:
  Fly   202 KNLGIHPPKGVLLYGPPGTGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKE 266

  Fly   244 NSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPAL 308
            .:|:||||||:|||.|||||::...||||||.:||||||:|||..|.:||||.||||.|.|||||
  Fly   267 KAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSTADIKVIAATNRVDILDPAL 331

  Fly   309 LRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHA 373
            ||.||||||||.|.|:...:..:....:.||||..||:.|::....|..:.|...|:|.||||.|
  Fly   332 LRSGRLDRKIEFPHPNEEARARIMQIHSRKMNVSNDVNFEELSRSTDDFNGAQCKAVCVEAGMIA 396

  Fly   374 VRENRYVVNAKDFEKGYKTSVRKDEAQHEFYS 405
            :|.:...|..:||.........|.:|...:|:
  Fly   397 LRRSANSVTHEDFMDAIMEVQAKKKANLNYYA 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3RNP_649938.2 PTZ00454 20..405 CDD:240423 163/404 (40%)
Rpt5NP_524464.1 PRK03992 28..421 CDD:179699 162/403 (40%)

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