Protein Alignment Rpt3R and psmc6

DIOPT Version :10

• Sequence 1: NP_649938.2
• Gene: Rpt3R / 41190
• FlyBaseID: FBgn0037742
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001003832.1
• Gene: psmc6 / 321585
• ZFINID: ZDB-GENE-030131-304
• Length: 389
• Species: Danio rerio
• Alignment Length: 366
• Identity: 154/366 - (42%)
• Similarity: 236/366 - (64%)
• Gaps: 4/366 - (1%)

  Fly    31 YKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVASTTG 95
            |:|..:|.:.|..:...::|:.:.|.|::..::.::|.:::|..::|:.|:.:.|...||.:|.|
Zfish    12 YRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNG 76

  Fly    96 SNYYVRVLSTIDREQLKPSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQ 160
            ..|.|.....:|:.:|||.:.|.|...:..::..:|.|.|..:..:|.::...:|||:||||..|
Zfish    77 PRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGSVSYSEIGGLSEQ 141

  Fly   161 KQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQK 225
            .:|:||.:|||||:.:|::::||.||:|.||:||||.|||:||:|||.....:|::||.|..|.|
Zfish   142 IRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDK 206

  Fly   226 YLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETT 290
            |:||..|::|::|..|:.:.|.|||:||||||..:||...|.||||:||.|:||||||||||...
Zfish   207 YIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLH 271

  Fly   291 NIKVIMATNRADTLDPALLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPD 355
            .:|:||||||.|||||||||||||||||.:.||:.:.:..:....:..:....|:|.|.|:...|
Zfish   272 RVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDILKIHSGPITKHGDIDYEAIVKLSD 336

  Fly   356 KISNADINAICQEAGMHAVRENRYVVNAKDFEKGYKTSVRK 396
            ..:.||:..:|.||||.|:|.:...|..:||.|    :|||
Zfish   337 GFNGADLRNVCTEAGMFAIRADHEYVTQEDFMK----AVRK 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3R	NP_649938.2	PTZ00454	20..405	CDD:240423	154/366 (42%)
psmc6	NP_001003832.1	PRK03992	4..379	CDD:179699	154/366 (42%)