DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3R and yta12

DIOPT Version :10

Sequence 1:NP_649938.2 Gene:Rpt3R / 41190 FlyBaseID:FBgn0037742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_596797.1 Gene:yta12 / 2541079 PomBaseID:SPBC543.09 Length:773 Species:Schizosaccharomyces pombe


Alignment Length:437 Identity:134/437 - (30%)
Similarity:200/437 - (45%) Gaps:78/437 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YVLYKKLQMELELIQVQ-EDYIKEEQRNLKKEFIHAQEEVKRIKAVPLVIGQFLEAVDENNGIVA 91
            |:||..|.....:.::. :|:   .|:.|.|..:.....|.| ..|.:::          .|.||
pombe   144 YILYNVLSPNANMQEITWQDF---RQQFLDKGLVERLVVVNR-NMVRVIL----------RGGVA 194

  Fly    92 STTGSNYY-VRVLSTIDRE--------QLKPSS--SVGLHKQSNCLVDLV--PPE---------- 133
            |.:|..|: :..:.:.||:        .:.||.  .|..|.:.:.|..|:  .|.          
pombe   195 SGSGQYYFSIGSIDSFDRKLEDAQRQLGIPPSEFVPVAYHDEVSVLATLLSFAPTLLIIGSVIYL 259

  Fly   134 ------------------ADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQ 180
                              ..|...|.:.:....|.::|:.|:|..|:||.|.|:. |.:.:.|::
pombe   260 SRRASGAAGGGQGGIFGIGKSRAKMFNHETDIKIKFADVAGVDEAKEEIMEFVKF-LKNPKFYER 323

  Fly   181 IGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNS 245
            :|...|||.:|.||||.|||:||||.|......|:.|.||||::.::|.||..|||||..|::|:
pombe   324 LGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNA 388

  Fly   246 PSIIFIDEIDAIATKR-FDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALL 309
            |.||||||||||...| ...|.|::.|.:..|.:||.:||||..:.:|.|...|||.|.||||||
pombe   389 PCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALL 453

  Fly   310 RPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDL--EDIIARPDKISNADINAICQEAGMH 372
            ||||.||:|.:..||...:..:|......:...:::||  :.:.......:.|||..:|.|..:.
pombe   454 RPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDLIAKRLAVLTSGFTGADIMNVCNEGALI 518

  Fly   373 AVRENRYVVNAKDFEKGY------------------KTSVRKDEAQH 401
            |.|.|...|....||:..                  |.:|...||.|
pombe   519 AARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKNTVAHHEAGH 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3RNP_649938.2 PTZ00454 20..405 CDD:240423 134/437 (31%)
yta12NP_596797.1 HflB 140..734 CDD:440233 134/437 (31%)

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