DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3R and rpt-2

DIOPT Version :10

Sequence 1:NP_649938.2 Gene:Rpt3R / 41190 FlyBaseID:FBgn0037742 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_504558.1 Gene:rpt-2 / 178988 WormBaseID:WBGene00004502 Length:443 Species:Caenorhabditis elegans


Alignment Length:411 Identity:192/411 - (46%)
Similarity:286/411 - (69%) Gaps:38/411 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLLKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDYIKEEQRNLKKEFIHAQEE 65
            ::|||.|       .::.|              |.||.|.||.||....:|:|         |||
 Worm    63 LKLLKSE-------RIKDY--------------LLMEQEFIQNQERLKPQEER---------QEE 97

  Fly    66 ----VKRIKAVPLVIGQFLEAVDENNGIVASTTGSNYYVRVLSTIDREQLKPSSSVGLHKQSNCL 126
                |..::..|:.:|...|.:|:.:.||::..||.:||.::|.:|:|||:|..||.|:.:::.:
 Worm    98 ERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNVGSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAV 162

  Fly   127 VDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLL 191
            :.::..:.|..:|::..::.|..:|:|:||||.|.|||:|||||||||.:.|:::||.||:||:|
 Worm   163 IGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKGVIL 227

  Fly   192 FGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDA 256
            :|.||.|||:||||||:.|:|:|:|:||||.:|||||:||:|||:|||:|::|:|||:|||||||
 Worm   228 YGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSIVFIDEIDA 292

  Fly   257 IATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELP 321
            :.|||:|:.:|.:||:||.:||||||:||||...::||:|||||.::|||||:||||:|||||.|
 Worm   293 VGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVLMATNRIESLDPALIRPGRIDRKIEFP 357

  Fly   322 LPDRRQKRLVFTTITSKMNVGEDVDLEDIIARPDKISNADINAICQEAGMHAVRENRYVVNAKDF 386
            |||.:.||.:|...||:|.:|::|:||:.|...|::|.|||.|:|.|||:.|:||.|..|..:||
 Worm   358 LPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRERRMRVTMEDF 422

  Fly   387 EKGYKTSV---RKDEAQHEFY 404
            :|. |.:|   :|:.|..|.|
 Worm   423 QKS-KENVLYRKKEGAPEELY 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3RNP_649938.2 PTZ00454 20..405 CDD:240423 187/392 (48%)
rpt-2NP_504558.1 PTZ00361 1..443 CDD:185575 192/411 (47%)

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