DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3R and Rpt1

DIOPT Version :10

Sequence 1:NP_649938.2 Gene:Rpt3R / 41190 FlyBaseID:FBgn0037742 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_309476.3 Gene:Rpt1 / 1270756 VectorBaseID:AGAMI1_001458 Length:434 Species:Anopheles gambiae


Alignment Length:406 Identity:167/406 - (41%)
Similarity:238/406 - (58%) Gaps:24/406 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRLLKEEIAQFHEQSLEKYDGLDPHDLYVLYKKLQMELELIQVQEDY------------IKEEQR 53
            ||.:|.:..:. |..:|..|.:| .:|...|.:.|....:.|:.||.            |||...
Mosquito     9 MRKVKADNKEV-EPEIEALDEVD-IELLKTYGQGQYHKSIKQIDEDIQKAMKQVNELTGIKESDT 71

  Fly    54 NLKKEFIHAQEEVKRI--KAVPLVIGQFLEAV----DENNGIVASTTGSNYYVRVLSTIDREQLK 112
            .|....:......|:|  ...||.:.:..:.:    |:...|:.....:.:.|.:..::....::
Mosquito    72 GLAPPALWDLASDKQILQNEQPLQVARCTKIINADSDDPKYIINVKQFAKFVVDLADSVAPTDIE 136

  Fly   113 PSSSVGLHKQSNCLVDLVPPEADSTISMLSPDEKPDISYSDIGGLDIQKQEIREAVELPLTHAQL 177
            ....||:.:....:...:||:.|.|::|:..:||||::|||:||...|.:::||.||.||.|.:.
Mosquito   137 EGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPEK 201

  Fly   178 YKQIGIDPPRGVLLFGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAK 242
            :..:||:||:|||||||||.|||:.|:|||:.|.|.||||:|||.||||:|||.||||:||.:|:
Mosquito   202 FVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMAR 266

  Fly   243 QNSPSIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPA 307
            .....:||.||||||...|||...|.|.||||.:|||:||:||||...||||:|||||.||||||
Mosquito   267 SKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPA 331

  Fly   308 LLRPGRLDRKIELPLPDRRQKRLVFTTITSKMNVGEDVDLEDIIAR--PDKISNADINAICQEAG 370
            |:||||||||:|..|||...:..:|......|:|..|:..| ::||  |:. :.|:|.::|.|||
Mosquito   332 LMRPGRLDRKVEFGLPDLEGRTHIFKIHARSMSVERDIRFE-LLARLCPNS-TGAEIRSVCTEAG 394

  Fly   371 MHAVRENRYVVNAKDF 386
            |.|:|..|.|...|||
Mosquito   395 MFAIRARRKVATEKDF 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3RNP_649938.2 PTZ00454 20..405 CDD:240423 162/387 (42%)
Rpt1XP_309476.3 None

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