DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pnn and pnn

DIOPT Version :9

Sequence 1:NP_001097727.1 Gene:Pnn / 41185 FlyBaseID:FBgn0037737 Length:307 Species:Drosophila melanogaster
Sequence 2:NP_001005707.1 Gene:pnn / 448224 XenbaseID:XB-GENE-6258583 Length:691 Species:Xenopus tropicalis


Alignment Length:313 Identity:87/313 - (27%)
Similarity:158/313 - (50%) Gaps:29/313 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VDDLEQKLNSAKQSLVILNENIRRIAGRVPKESLQRSEKFKYTQDGKK----------------N 58
            |..|:::|..||:||..::||||::.||.|.|: :.::..:.:..|..                :
 Frog     5 VRTLQEQLEKAKESLKNVDENIRKLTGRDPNET-RPAQARRLSLTGPNVVGGRGRGGILLRRGLS 68

  Fly    59 EHNGDRPFPRNATPGGVFK---DKRRMYESKNPISRFPIEENEGRPPRINSRVI--REMPTKKEI 118
            :..|..|..:....|.:.:   ::|:..||:   .....|:.:.:.|.:.|.|:  .:..|::::
 Frog    69 DSGGGPPAKQRDFEGALNRLGGERRQRRESR---QESDAEDEDDKKPALQSSVVATSKERTRRDL 130

  Fly   119 VEAQGTDSESRARNRRMFGSLLGTLQKFCQEESRLKSKEDKKAEIDRKVEKQELQERAMLRKQRE 183
            ::.|..|.:.:.||||:||.|:||||||.||.:....::.::.||::|:|.|..:|:..:..:|.
 Frog   131 IQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESNVATEQQKRRHEIEQKLEVQAEEEKKQVETERR 195

  Fly   184 TLFLDRKKKQFEIRRLEYKMARMKDFKVWEATMLNAKNNIRTKTKPHLFFRPKVHSPRTEKLLSK 248
            .||.:|:.||.|:|.||.|:......:.|..........||||||||||:.|....|.::||..:
 Frog   196 ELFEERRTKQTELRLLEQKVELAHLQEEWNDHNKKIIKYIRTKTKPHLFYIPGRMCPPSQKLFDE 260

  Fly   249 SKSEADVFIEFRREELEVELKNLE----NMNFGKMEDDTAIDESFYEEPDDEE 297
            |:.:.:...|.||.|...:|..:|    ..:....:.:...:|...|..:|:|
 Frog   261 SQKKLNAIFESRRLEFAEQLNKMEARPRRQSMKDRDQEKKPEEQNEEHTEDQE 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PnnNP_001097727.1 Pinin_SDK_memA 126..250 CDD:282541 47/123 (38%)
pnnNP_001005707.1 Pinin_SDK_N 1..134 CDD:368062 27/132 (20%)
Pinin_SDK_memA 138..257 CDD:368061 45/118 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 90 1.000 Domainoid score I7692
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133908
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005515
OrthoInspector 1 1.000 - - oto102524
Panther 1 1.100 - - LDO PTHR12707
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1769
SonicParanoid 1 1.000 - - X5120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.040

Return to query results.
Submit another query.