DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VII and side-VI

DIOPT Version :10

Sequence 1:NP_649933.1 Gene:side-VII / 41184 FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001036705.1 Gene:side-VI / 4379854 FlyBaseID:FBgn0083950 Length:1087 Species:Drosophila melanogaster


Alignment Length:1082 Identity:335/1082 - (30%)
Similarity:517/1082 - (47%) Gaps:208/1082 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IVGENIYLPCNVTTYDGDEPV-LVLWYRDDKGTPIYSIDIRAGVSKAPKRWSDDSVFGDRAYFIF 94
            :|..:..:.|:|.:...|:.| ||:||:::  .||||.|.|...:..|..|.|:.|..|||.|..
  Fly    38 LVNSSAQIKCDVGSSQADDKVLLVVWYKNN--LPIYSYDTRGAHAGTPSHWRDEEVLEDRAVFRT 100

  Fly    95 DKEPGKLSIQNTQASDSGTYRCRVDFLKAQTINSRIRLNVISPPKQVIIRDSSNVERSTVVGPYS 159
            .|||.:|.|...:..|:|.:||||||..:||.||.:.|.|:.||.|.||.:...:...:..|||.
  Fly   101 HKEPAELIINPVKEKDAGNFRCRVDFKLSQTRNSNVNLEVVVPPTQPIIFNERRLRIDSRAGPYE 165

  Fly   160 EGDIVSLKCQVIGGYPTPTISWYRDGIEIPCELSHLAGGKIIECEITLPSLGREDLNSRLTCRAL 224
            ||..:.:.|.|.||.|.||:.|..:| ::...:........|..::.:.:|.|...::..||:| 
  Fly   166 EGGSLEVTCVVYGGSPPPTVIWLMNG-QLQNSVVDYTYDGAINSKLVVRNLSRIHQHAVYTCQA- 228

  Fly   225 SHPRAPIVEAVVQIDMNFAPLNIRLLGAHQPLSAGRRYDLLCQSAGSRPPAVITWWQNGIRLEKT 289
            |:.....|...:.||:...||.:.:...:||:||.|:|::.||:.||||||.||||...:.|...
  Fly   229 SNFHKKYVATNITIDLYLRPLLVEISFNNQPMSADRKYEIECQAIGSRPPAKITWWMGNLELHGH 293

  Fly   290 TETTSSDGNQTTSTLSISLSKSDAGKYLSCKAYNHAVPSEPLEDGWKLDIQYVPEAYVRLGTSLD 354
            ::..|.|||.:||.|||:.::.|.||.|||:|.|..|.:...|...||::.::|...:.||::|:
  Fly   294 SQKVSEDGNVSTSVLSITPTREDHGKALSCRATNELVRNGIRETAMKLNVFFIPTLQLDLGSNLN 358

  Fly   355 PSTLREGTDVYFDCLVMAHPNVFRIEWRHNEQPLSHNISLGVIISNHSLVLQGVTRATAGNYSCV 419
            |..:.||.||||:|.|.|:|..:::.|:||.|.:.||...|||:|:..|.||||||..||||:|.
  Fly   359 PEDIEEGDDVYFECKVHANPAAYKVVWKHNHQIIQHNQRAGVIVSSGDLALQGVTRHQAGNYTCT 423

  Fly   420 GFNAEGEGISAPFALNILYAPTCAQNQKKVYGIAKQEDAKVMCTVDANPREVEFSWTFNNSAESI 484
            ..|.||:|.|....|.::|.|.|..:|||:||:|:.|.|:::|.|||.|....|.|:|||:||:.
  Fly   424 ASNVEGDGDSNVVELKVMYKPICRPDQKKIYGVARNEAAEIVCEVDAFPPPENFKWSFNNTAETF 488

  Fly   485 DVATN----HIIRSGTTSIVTYTPITELDYGTLLCLASNKIGKQRVPCVFHIIAAGRPEKVHNCT 545
            |:..:    |   |...|.:||||:.|:|:||::|.|.|.:|:|:.|||||:||||:||...|||
  Fly   489 DMPQSGFRPH---SAQGSTLTYTPVKEMDFGTIMCWADNNVGQQKEPCVFHLIAAGKPEAPTNCT 550

  Fly   546 VNNISMTSLTVTCSDGFNGGLPQSFNLELLDSYTQEIKANITSTIPKFTVPGLSPGSIYRLNIYA 610
            |.|.:..||.|.|.:||:||:.|.|.:|:.|.::.:::|||::.....:|.||..|.::|:.:||
  Fly   551 VVNQTSDSLEVYCIEGFDGGMRQWFLMEIFDQHSGQLQANISAKFAALSVTGLDAGRLFRIYVYA 615

  Fly   611 FNTKGRSDPAIVNAAMLRMPEKQLTSEQTHNLRAE----LLFSPVMSLTIGLTLAVLVAVLAI-- 669
            .|.:||||...::...|:..|||..:..::...|:    ...:|::|  ||:.:.:|||::.|  
  Fly   616 VNGRGRSDAIALDGYTLKAAEKQTVALTSYKGSAQSPDNFELTPILS--IGIFVGILVAIVCIGI 678

  Fly   670 --ILALRIPCTASSRRRQKELSNENISRDESPGPSDK----SSGSKEVDDCDEKNPDVVP-ESIE 727
              |.||::......::::....|...||..:....||    .|.|:|:  .||||||||| ..::
  Fly   679 GTIAALKLRSHKHQQQQKFVHPNAKFSRPGNLQIKDKISLPLSHSEEM--YDEKNPDVVPYNEVD 741

  Fly   728 PDEQAESIRKRQ--QIST------------------IDTNRSPNRGIFVNEQQHLTAAEISL--- 769
            .:.:.:|..:..  .:||                  :..|.:.:.....::...|..||:||   
  Fly   742 GEYKQKSATQTPSGHLSTTSEVEISCKPGSTSGTGIVQANSADSGTYQSSKDDELHYAELSLTNM 806

  Fly   770 -----------RASHGIGYCTLRSGMHAQAQSSVGEISINVTPHVYSNSISQCTLPRQSSQNVWN 823
                       :...|:|  .::..:..|.|...|::.   .||    .:...|||..||..   
  Fly   807 PSGSSGASKKGQPMGGVG--VVQHVVQQQQQQQQGQVQ---HPH----QLLGGTLPHGSSMR--- 859

  Fly   824 NYNCNITGARPTSTFHQLTFPQGRVNVGGHNPAQPLHGHAPSPSQ-------------------- 868
                .:....|.:.    |..:.:.|.||   .|..|.|||.|:.                    
  Fly   860 ----KLLPTIPATA----TLQRHKPNAGG---MQHPHQHAPPPTYDYDYFEEPTIYAQIDAYKTM 913

  Fly   869 -----------------------ASNSSMAS----ST--------NTLPQ--------PHPH--- 887
                                   ||.||..|    ||        .||||        ||.|   
  Fly   914 QVDTGVVVAGVGAGAGSGVNGAGASISSPGSHGTPSTVSPGTVQMYTLPQHPGGYHTLPHNHHAQ 978

  Fly   888 ---------------------GRTIAMHH------------------MNQAQCGRVCI-----GI 908
                                 .:...|||                  ..|...|::.:     |:
  Fly   979 QQMAGGPQNSASMMQMMQQQQQQQQQMHHHPASNMPPSYQQHQQQQQQQQMAHGQMLVSSNSSGL 1043

  Fly   909 AS------------DGIHSAEQNVSDDEVTVQTPLMIKRDST 938
            ||            .|:....::.|.:.|||:||||..:..:
  Fly  1044 ASTTAAVASPSSSLSGLSGVGKSYSREIVTVRTPLMYSQQES 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VIINP_649933.1 V-set 32..134 CDD:462230 41/102 (40%)
Ig_3 160..223 CDD:464046 16/62 (26%)
Ig 256..328 CDD:472250 35/71 (49%)
Ig strand B 262..266 CDD:409353 1/3 (33%)
Ig strand C 276..280 CDD:409353 2/3 (67%)
Ig strand E 302..306 CDD:409353 2/3 (67%)
Ig strand F 316..321 CDD:409353 3/4 (75%)
Ig 351..426 CDD:472250 36/74 (49%)
Ig strand B 364..368 CDD:409353 3/3 (100%)
Ig strand C 375..382 CDD:409353 0/6 (0%)
Ig strand E 401..405 CDD:409353 1/3 (33%)
Ig strand F 415..420 CDD:409353 3/4 (75%)
Ig_3 <456..519 CDD:464046 28/66 (42%)
FN3 538..620 CDD:238020 34/81 (42%)
side-VINP_001036705.1 IG_like 35..140 CDD:214653 41/103 (40%)
Ig_3 165..230 CDD:464046 17/66 (26%)
Ig 262..343 CDD:472250 37/80 (46%)
Ig strand B 266..270 CDD:409416 1/3 (33%)
Ig strand C 280..284 CDD:409416 2/3 (67%)
Ig strand F 320..325 CDD:409416 3/4 (75%)
Ig strand G 336..339 CDD:409416 1/2 (50%)
Ig_3 358..426 CDD:464046 33/67 (49%)
Ig_3 456..524 CDD:464046 29/70 (41%)
FN3 545..622 CDD:473895 29/76 (38%)

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