DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-VII and side

DIOPT Version :10

Sequence 1:NP_649933.1 Gene:side-VII / 41184 FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001247334.1 Gene:side / 43300 FlyBaseID:FBgn0016061 Length:986 Species:Drosophila melanogaster


Alignment Length:984 Identity:273/984 - (27%)
Similarity:411/984 - (41%) Gaps:188/984 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLFMLALQLI-------ESSIGSKDVPIHQIESIVGENIYLPCNVTTYDGDEPV-LVLWYRDDKG 61
            |:.:..||.:       ||....|::|...:.:.:|:.:.|||::|.....:.| |:||::|..|
  Fly    70 LVLLTCLQQLKSVSADEESQDFQKNIPARLVWAALGKTVELPCDLTPPTSQDSVKLLLWFKDTTG 134

  Fly    62 TPIYSIDIRAGVSKAPKRWSDDSVFGDRAYFIFDKEP--GKLSIQNTQASDSGTYRCRVDFLKAQ 124
            .|:||:|.|.|..|.....:..|..|.|.:|.....|  .:|.|.:.:..|.|.|||||||..:.
  Fly   135 IPLYSLDSRGGNVKLAPHAAIASDLGQRLFFSIGDNPKDSRLQINDVKPEDGGVYRCRVDFFNSP 199

  Fly   125 TINSRIRLNVISPPKQVIIRDSSNVERSTVVGPYSEGDIVSLKCQVIGGYPTPTISWYRDGIEIP 189
            |.|.|..|.::.||::..|.|:...|.|.:.||:.||..:.|.|||.||.|.|.::|:||..|: 
  Fly   200 TRNFRHNLTLVVPPEEPRIFDAQGKEISQMAGPFREGYELFLCCQVRGGRPPPKVTWWRDDTEL- 263

  Fly   190 CELSHLA---GGKIIECEITLPSLGREDLNSRLTCRALSHPRAPIVEAVVQIDMNFAPLNIRLLG 251
            ...||.:   |..::..::.:.:..|:....|:.|||........|...|.:.:...|:.:::..
  Fly   264 IGTSHTSVEEGATVMVNQLLIGTTTRDFYGIRIECRAQGTRLVDPVRKDVTVQVYLKPVRVKIAT 328

  Fly   252 AHQPLSAGRRYDLLCQSAGSRPPAVITWWQNG--IR-LEKTTETTSSDGNQTTSTLSISLSKSDA 313
            .::.|:||:...:.|:|.||.|.|.|||..:|  || .|.|..:...|||.|||.|::.::..:.
  Fly   329 PNELLTAGQPMPIRCESWGSYPAAKITWLLDGEPIRNAEVTVHSDKEDGNITTSILTLKVTSEND 393

  Fly   314 GKYLSCKAYNHAVPSEPLEDGWKLDIQYVPEAYVRLGTSLDPS---TLREGTDVYFDCLVMAHPN 375
            ...|:|:|.|.......:||...:.:.|.|...|.|... |||   |..||.:|.|.|...|.|.
  Fly   394 NAELTCRATNPWFSGGAIEDKRIIRVAYPPTVSVHLANE-DPSRLVTRAEGQNVTFKCRADARPP 457

  Fly   376 VFRIEWRHNEQPLSHNISLGVIISNHSLVLQGVT---RATAGNYSCVGFNAEGEGISAPFALNIL 437
            |....|..|          |:.:|..|..:..:|   |.:||.|:|...|.|||..|:...|.:.
  Fly   458 VTSYSWFKN----------GMRMSGESTEIMHLTQLERESAGAYACGATNTEGETRSSSLTLKVQ 512

  Fly   438 YAPTCAQNQKKV-YGIAKQEDAKVMCTVDANPRE-VEFSWTFNNSAESIDVATNHIIRSGTTSIV 500
            ::|.|....::. .|........|.|.|||:|.: |.||||:||:.....|..:.|..:|..|.|
  Fly   513 FSPRCKSGTEQTSIGAVSLHSILVKCEVDADPPDSVRFSWTYNNTRNVSPVLNSRIQSNGLASTV 577

  Fly   501 TYTPITELDYGTLLCLASNKIGKQRVPCVFHIIAAGRPEKVHNCTVNNISMTSLTVTCSDGFNGG 565
            ||.|.|:.:..||.|.|||.:|:|..||:.||:.|..||....|.:.|  .|.|.|.|..|.:||
  Fly   578 TYLPQTDSELITLACWASNAVGRQTTPCLVHILPANTPEAPKACELRN--DTVLEVVCVAGSDGG 640

  Fly   566 LPQSFNLELL----------------------------DSYTQEIKANITS--------TIPKFT 594
            |.|.|.||::                            |:....:....||        ..|:|.
  Fly   641 LSQYFMLEVVGGDPLYSGDPGGSAGQGRGQFSEAIGLGDNEISTLNDQATSAPIFRMQENSPQFR 705

  Fly   595 VPGLSPGSIYRLNIYAFNTKGRSDPAIV-----NAAMLRMPEKQLTSEQ------THN------- 641
            :..|.||..|:..:||.|.||||:|.:|     .||.|...::.:.||.      ||:       
  Fly   706 LNNLEPGREYQFLVYAVNAKGRSEPPVVIENVRVAAQLGPYDESILSEDPTPAETTHHGGGGVGG 770

  Fly   642 --------LRAELLFSPVMSLTIGLTLAVL----VAVLAIILA-LRIPCTASSRRRQKELSNENI 693
                    ..|.....|....|:.:..||:    |.|.:||:| :.:.|    |.|.:....:.:
  Fly   771 SGSSSGLGTGASTGSGPEKQSTLLILAAVVVIGAVVVTSIIVAGIVVVC----RHRPRPPEPQEV 831

  Fly   694 SRDESPGPSDKSSGSKEVDDCDEKNPDVVPESIEPDEQAESIRKRQQISTIDTNRSPNRGIFVNE 758
            .:...|..:|..|...|.|:.:|..        |...:|..||.|.        ..||       
  Fly   832 RKSMRPARNDVPSMYIEEDELNELE--------EGGGRAADIRARV--------APPN------- 873

  Fly   759 QQHLTAAEISLRASHGIGYCTLRSGMHAQAQSSVGEISINVTPHVY-SNSISQCTLPRQSSQNVW 822
             .||.          |.|...:..|:.:...:.||...    ||.| |.|..|...|..:...: 
  Fly   874 -SHLC----------GGGGMPMPGGVGSSGGAIVGVAG----PHHYISESFIQYAQPSLNGDVL- 922

  Fly   823 NNYNCNITGARPTSTFHQLTFPQGRVNVGGHNPAQPLHGHAPSPSQASNSSMASSTNTLPQ---- 883
              ....:|.::|.||                                 ||:::|....:||    
  Fly   923 --LPLLVTSSQPCST---------------------------------NSTISSVVLAMPQAKLC 952

  Fly   884 PHPHGRTIA 892
            |.|..|..|
  Fly   953 PDPASRNTA 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VIINP_649933.1 V-set 32..134 CDD:462230 38/104 (37%)
Ig_3 160..223 CDD:464046 20/65 (31%)
Ig 256..328 CDD:472250 28/74 (38%)
Ig strand B 262..266 CDD:409353 0/3 (0%)
Ig strand C 276..280 CDD:409353 2/3 (67%)
Ig strand E 302..306 CDD:409353 2/3 (67%)
Ig strand F 316..321 CDD:409353 2/4 (50%)
Ig 351..426 CDD:472250 25/80 (31%)
Ig strand B 364..368 CDD:409353 2/3 (67%)
Ig strand C 375..382 CDD:409353 1/6 (17%)
Ig strand E 401..405 CDD:409353 1/3 (33%)
Ig strand F 415..420 CDD:409353 2/4 (50%)
Ig_3 <456..519 CDD:464046 26/63 (41%)
FN3 538..620 CDD:238020 32/117 (27%)
sideNP_001247334.1 V-set 95..211 CDD:462230 39/115 (34%)
Ig 211..301 CDD:472250 29/90 (32%)
Ig strand B 239..243 CDD:409353 1/3 (33%)
Ig strand C 253..257 CDD:409353 0/3 (0%)
Ig strand E 281..285 CDD:409353 0/3 (0%)
Ig strand F 295..300 CDD:409353 2/4 (50%)
Ig 326..408 CDD:472250 28/81 (35%)
Ig strand B 339..343 CDD:409353 0/3 (0%)
Ig strand C 353..357 CDD:409353 2/3 (67%)
Ig strand E 384..388 CDD:409353 1/3 (33%)
Ig strand F 396..401 CDD:409353 2/4 (50%)
Ig_2 442..511 CDD:464026 25/78 (32%)
FN3 <700..735 CDD:238020 15/34 (44%)

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