DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment side-VII and ed

DIOPT Version :9

Sequence 1:NP_001262432.1 Gene:side-VII / 41184 FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_001260013.1 Gene:ed / 33619 FlyBaseID:FBgn0000547 Length:1332 Species:Drosophila melanogaster


Alignment Length:1259 Identity:246/1259 - (19%)
Similarity:382/1259 - (30%) Gaps:476/1259 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RWS------DDSVFGD---RAYFIFDKEPGK----LSIQNTQAS-DSGTYRCRVDFLKAQTINSR 129
            ||:      |:...|:   .:.:..|.:|.:    |.|:|...: |:|.:.||:   ||:...:.
  Fly    75 RWTANPAQFDNVAIGEVQLSSGYRLDFQPERGIYDLQIKNVSYNRDNGRFECRI---KAKGTGAD 136

  Fly   130 I-----RLNVISPPKQVIIRDSSNVERSTVVGPYSEGDIVSLKCQVIGGYPTPTISWYRDGIEIP 189
            :     .|.|::||...:| ...|:..:|      |...:.|.|..|||.|.|||:|||:|...|
  Fly   137 VHQEFHNLTVLTPPHPPVI-SPGNIAVAT------EDKPMELTCSSIGGSPDPTITWYREGSNTP 194

  Fly   190 CELSHLAGG-KIIECEITLPSL-GREDLNSRLTC----RALSHPRAPIVEAVVQIDMNFAPLNIR 248
            ...:.|.|| |......||..: .|||..::..|    ||::..:.  :||...:::|:.|   |
  Fly   195 LPATVLKGGTKDQPTNATLSIIPRREDDGAKYKCVVRNRAMNEGKR--LEATATLNVNYYP---R 254

  Fly   249 L-LGAHQPLSAGRRYDLLCQSAGSRPPAV--ITWWQNGIRLEKTTETTSSDGNQTTSTLSISLSK 310
            : :|...||...|......:......|.|  :.|.:||       ...||....|...:|:    
  Fly   255 VEVGPENPLRVERDRTAKLECNVDAKPKVPNVRWNRNG-------RFISSSLVHTIHRVSV---- 308

  Fly   311 SDAGKYLSCKAYNHAVPSEPLEDGWKLDIQYVPEAYVRLGTSLDPSTLREGTDVYFDCLVMAHPN 375
            .||||| :|.|.|..  .:..|....|||.|.|...:...|    ....||..|...|.|.|:|.
  Fly   309 QDAGKY-TCIADNGL--GKTGEQELILDILYPPMVVIESKT----REAEEGDTVTIRCNVTANPA 366

  Fly   376 VFRIEW--------------------------------------------------------RHN 384
            ...|||                                                        ||.
  Fly   367 PVTIEWLKENSPDFRYNGDVLTLTSVRADHAGNYICRAVNIMQSQGMERSERVGNSTVALLVRHR 431

  Fly   385 --------EQPLSH---NISL---------------------GVIISNHSLVLQG----VTRATA 413
                    .:|:.|   .::|                     |...|...::.||    :.:|..
  Fly   432 PGQAYITPNKPVVHVGNGVTLTCSANPPGWPVPQYRWFRDMDGEFSSTQKILAQGPQYSIPKAHL 496

  Fly   414 GN---YSCVGFNAEGEGISAPFALNIL---------------------YAPTCA----------- 443
            ||   |.|...|..|.|:.|...|.|.                     |..||:           
  Fly   497 GNEGKYHCHAVNELGIGMMATIVLEIHQPPQFLAKLQQHMTRRVADTDYTVTCSAKGKPAPSVKW 561

  Fly   444 ------------------------------QNQKKVYGIAK------------------------ 454
                                          |:|.|..|.|:                        
  Fly   562 LKDAVEILPEENLYEVQTNPDQGLNGMVTVQSQLKFRGKARPNGNALVPGDRGLYTCLYQNEVNS 626

  Fly   455 --------------------------QEDAKVMCTVDANPREVEFSWTFNNSAESIDVATN-HII 492
                                      :|.|:|:|.|.|.|:. ||.|.|.|:...:.:::: |..
  Fly   627 ANSSMQLRIEHEPIVLHQYNKVAFDIRETAEVVCKVQAYPKP-EFQWQFGNNPSPLTMSSDGHYE 690

  Fly   493 RSGT-------TSIVTYTPITELDYGTLLCLASNKIGKQRVPCVFHIIAAGRPEKVHNCTVNNIS 550
            .|.|       ||::....:|..|||...|..:|.:...|.|  ..:...|.|||..|.....:.
  Fly   691 ISTTTDNNDIYTSVLKINSLTHSDYGEYTCRVANTLDTIRAP--IRLQQKGPPEKPTNLRATEVG 753

  Fly   551 MTSLTVTCSDGFNGGL--------------PQSFNL-----ELLDSYTQEIKANITSTIPKFTVP 596
            ...::::...||:|||              |:...|     .|.:|.:..::.:....|| ..|.
  Fly   754 HNYVSLSWDPGFDGGLSKTKFFVSYRRVAMPREEQLIPDCATLANSNSAWVEVDCQRDIP-CKVT 817

  Fly   597 GLSPGSIYRLNIYAFNTKG---RSDPAIVNAAMLRMPEK-QLTSEQTHNLRAELLFSPVMSLTIG 657
            .|.....|...:.|.|.|.   .|...:|...:.|:|.. |:|.|.  |.|       .:.:.:|
  Fly   818 ALEQHQSYAFKVKALNPKSDSPYSSEIMVTTKVSRIPPPLQVTYEP--NTR-------TLGIDVG 873

  Fly   658 LTLAVLVAVLAIILALRIPCTA---------------SSRRRQKELS--------------NENI 693
            .|...||||:..::....|..|               ....::|.:.              ...|
  Fly   874 ATCLNLVAVVESMVNADSPMAAWEVVTTMDNLQLSGNGPTHKEKIIDRIIGARRVGGGRALGHTI 938

  Fly   694 SRDE------SPGPSDKSSGSKEVDDCDEKNPD---------------------VVPESI----- 726
            |.||      |....|::|.:..|..|...||:                     ..|..|     
  Fly   939 SEDEDDNGLNSLALEDENSPTVRVKLCLRTNPEHCGDYTDAEIGRPYIAEANALATPTLIAIIVS 1003

  Fly   727 ---------------------------EPDEQAESIRKRQQISTIDTNRS-----PNRGIFVNEQ 759
                                       ..|.:.:|:  |..|.....|::     |..|:.....
  Fly  1004 CVVFALFAGLILMFCRCKRNQSKKSAAAKDYEMDSV--RPSIVAAQQNQAPPPYYPASGLDNKAL 1066

  Fly   760 QHLTAAEISLRASHGIGYCTLRSGMHAQAQSSV-------GEISINVTPHVYSN----------- 806
            :|.....:|:.......|.| ::|......|.|       |.:.:.|...|.|.           
  Fly  1067 EHSMDLALSMEDQKTALYAT-QNGYSYHPGSGVVGVGMGGGVVGVGVGGSVVSGMGGGVGGIGGS 1130

  Fly   807 --------SISQCTLPRQSSQNVW-------NNYNCNITGARPTS--TFHQLTF-------PQGR 847
                    .:|..|:|    .|.|       |||:.:..|....|  :..|:..       .||.
  Fly  1131 GVGVNGIPGLSAHTMP----GNEWVNMGYMENNYSNSNNGGSVNSQDSLWQVKMSAAAVGNQQGM 1191

  Fly   848 VN--VGGHNPAQPLHGHAPSPSQASNSSMASSTNTLPQPH----PHGRTIAMHHMNQAQCGRVCI 906
            |.  :..:...||.:|:.|    .::....:..:..|.||    |.......|::..:|      
  Fly  1192 VQAPMNQYVEQQPAYGYDP----LTHGGYGAVDDYAPYPHLTATPSQVGDEYHNLRNSQ------ 1246

  Fly   907 GIASDGIHSAEQNVSDDEVTVQTP 930
                  ..|.:...||...:||.|
  Fly  1247 ------NPSRQDYCSDPYASVQKP 1264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VIINP_001262432.1 IG_like 32..134 CDD:214653 16/73 (22%)
V-set 32..134 CDD:284989 16/73 (22%)
IGc2 160..>214 CDD:197706 22/55 (40%)
Ig 262..328 CDD:299845 17/67 (25%)
IG_like 264..323 CDD:214653 16/60 (27%)
IGc2 360..425 CDD:197706 25/159 (16%)
Ig_3 456..519 CDD:290638 22/70 (31%)
FN3 538..620 CDD:238020 22/103 (21%)
FAM176 643..741 CDD:291517 26/185 (14%)
edNP_001260013.1 Ig 50..147 CDD:299845 16/74 (22%)
I-set 146..249 CDD:254352 35/111 (32%)
Ig 168..249 CDD:299845 28/82 (34%)
IGc2 268..323 CDD:197706 17/68 (25%)
Ig_3 341..406 CDD:290638 11/68 (16%)
Ig_2 437..514 CDD:290606 14/76 (18%)
I-set 526..633 CDD:254352 8/106 (8%)
Ig 546..632 CDD:143165 7/85 (8%)
IG_like 654..736 CDD:214653 25/84 (30%)
Ig 656..734 CDD:143165 24/80 (30%)
FN3 741..848 CDD:238020 23/107 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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