DRSC/TRiP Functional Genomics Resources

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Protein Alignment side-VII and igcm-1

DIOPT Version :9

Sequence 1:NP_001262432.1 Gene:side-VII / 41184 FlyBaseID:FBgn0037736 Length:939 Species:Drosophila melanogaster
Sequence 2:NP_508166.1 Gene:igcm-1 / 180433 WormBaseID:WBGene00018215 Length:1073 Species:Caenorhabditis elegans


Alignment Length:921 Identity:198/921 - (21%)
Similarity:313/921 - (33%) Gaps:330/921 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLLLFMLALQLIESSIGSKDVPIHQIESIV------GENIYLPCNV-TTYDGDEPVLVLWYRDDK 60
            |..||.|.|..:.:|..|.||.:.:..|..      .|.|.:||.| ..|...:...:.|.|.:.
 Worm     6 LFFLFFLFLVQLTNSADSSDVFLKEPSSEPYFLQEGNEGIVIPCVVKPEYFDRQKYEINWARYNN 70

  Fly    61 GTPIYSIDIRAGVSKAPKRWSDDSVFGDRAYFIF--DKEPGKLSIQNTQA---SDSGTYRCRVDF 120
            |      .:|. ::|     :|..:....:.||.  |...|..|::.|:.   |..|||.|.|  
 Worm    71 G------QLRM-ITK-----NDKLLAKKHSRFILENDSATGNYSLRITEVEKNSVEGTYHCNV-- 121

  Fly   121 LKAQTINSRIRLN------VISPPKQVIIRDSSNVERSTVVGPYSEGDIVSLKCQVIGGYPTPTI 179
              ..|.:|.::.:      |:.||...||   |.....:|:    |||.::.||..:||.|.||.
 Worm   122 --IGTDDSDVQYSALATVVVLVPPGDPII---STTPSESVI----EGDFMTAKCVSVGGSPQPTF 177

  Fly   180 SW----------------YRDGIE---IPCELSHLAGGKIIECEIT-LPSLGRE-------DLN- 216
            :|                :|||..   :...::....||.::|::| ...||.|       .|| 
 Worm   178 TWTLPNDTIASSAIFTTQFRDGATESLLHFRVTSSDDGKSVQCDVTNRAMLGGETKQVKSSQLNV 242

  Fly   217 ------------------------SRLTCRALSHPRA-------------------PI-VEAVVQ 237
                                    ..|||.:.|:|.|                   || |::.:.
 Worm   243 LYKPVVFVTPTENLTHLSVEEGELVNLTCNSASNPPAHSYEWKHIASGERYQGKIWPIRVDSSMS 307

  Fly   238 IDMNFAPLN--------IRLLGAHQP-------LSAGRR--YDLLCQSAGSRPPAVITWW----- 280
            .|......|        ::::..|.|       :|....  .|:||: ..:.|..:...|     
 Worm   308 GDFECRSTNELGEGTAVLKMVVQHIPRINVPESISPNEMEDIDILCE-VSAVPEVIDIKWVGPNG 371

  Fly   281 --QNGIRLEKTTETTSSDGNQT--------------------TSTLSISLSK------------- 310
              |||.||..|:.:.:..||.|                    |.|..:.:.:             
 Worm   372 FKQNGSRLTITSISKAQSGNYTCMATNFLTVYGHSGSQQRMGTGTTIVDVKRKPGQAQIVSARQN 436

  Fly   311 ---------------------------------------------------SDAGKYLSCKAYNH 324
                                                               ||.|.| |||||| 
 Worm   437 VDVGETIKLMCQAEDAGNPSASYTWASPSSGGIFGLEGHTEKSFEVRNAQLSDNGVY-SCKAYN- 499

  Fly   325 AVPSEPLEDGWKLDIQYV----------PEAYVRLGTSLDPSTLREGTDVYFDCLVMAHPNVFRI 379
                 .|.:| |:....:          |.|..|:.||.:...:.|       |....:|:.. |
 Worm   500 -----DLGEG-KIGTVMITVIEKARISSPLATERIFTSGEQGKILE-------CEAQGYPSPV-I 550

  Fly   380 EWRHNEQPLSHNISLGVIISN--------------HSLVLQGVTR-ATAGNYSCV---GFNAEGE 426
            :|..:.:|:..:|......|.              .:|.|.|..: :..||::||   |.:...:
 Worm   551 KWLKDGRPVKQSIYASSATSESKCLPEDFCTQTVASTLTLAGPLKWSDKGNFTCVADNGSDKTDK 615

  Fly   427 GISAPFALNILYAPTCAQNQKKVYGIAKQE---DAKVMCTVDANPREVEFSWTFNNSAESIDVAT 488
            ..|:...:.:|:.|.....:.....:|..:   .|.:.|.|.|.| |.||.|.|.:|    :::.
 Worm   616 DSSSWTIVRVLHKPVFLNRKFPEKSLAAADIGSQAIIRCKVSARP-EPEFHWMFRDS----EISE 675

  Fly   489 N-----HIIRSGTT-------SIVTYTPITELDYGTLLCLASNKIGKQRVPCVFHIIAAGRPEKV 541
            |     |.:  |.|       .::....:.|.|||..:|.|:|..|...|  |..:.....|  .
 Worm   676 NERHSFHTV--GITGKPDEYEQLLQIESVQESDYGEYVCRATNGNGGDHV--VIELRKTSPP--A 734

  Fly   542 HNCTVNNISMTSLTVTCS--DGFNGGLPQSFNLEL--LDSYTQEIKAN----------------- 585
            ....:..:|.||.:|...  ..|:||..|::.||.  :|.:|.||..|                 
 Worm   735 LPLDLQKLSATSNSVLLGWVPQFDGGADQTYVLETRKIDPFTGEIDGNAPVSKLNINAVQQDQEI 799

  Fly   586 ----ITSTIPKFTVPGLSPGSIYRLNIYAFNTKGRSD--PA-------IVNAAMLRMPEKQL--T 635
                ::..|..||  ||:|.|.|.|.|.|.:.||.|:  |.       :|..|.:..|.:.:  :
 Worm   800 DGTLVSKNIFNFT--GLTPLSTYNLRIQAVSEKGESEFTPVLIASTEDVVEDANMMSPSRLVLDS 862

  Fly   636 SEQTHNLRAEL 646
            |||..|:..:|
 Worm   863 SEQKINVEPKL 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
side-VIINP_001262432.1 IG_like 32..134 CDD:214653 26/119 (22%)
V-set 32..134 CDD:284989 26/119 (22%)
IGc2 160..>214 CDD:197706 21/80 (26%)
Ig 262..328 CDD:299845 26/156 (17%)
IG_like 264..323 CDD:214653 23/149 (15%)
IGc2 360..425 CDD:197706 16/82 (20%)
Ig_3 456..519 CDD:290638 21/77 (27%)
FN3 538..620 CDD:238020 30/108 (28%)
FAM176 643..741 CDD:291517 1/4 (25%)
igcm-1NP_508166.1 Ig 45..119 CDD:299845 21/85 (25%)
Ig 146..226 CDD:299845 22/86 (26%)
Ig_3 245..316 CDD:290638 10/70 (14%)
IG_like 258..329 CDD:214653 11/70 (16%)
IG_like 338..398 CDD:214653 15/60 (25%)
IGc2 347..398 CDD:197706 14/51 (27%)
Ig_2 429..513 CDD:290606 13/91 (14%)
IG_like 437..513 CDD:214653 13/83 (16%)
Ig 537..615 CDD:143165 16/85 (19%)
IG_like 644..728 CDD:214653 25/92 (27%)
IGc2 646..719 CDD:197706 22/79 (28%)
FN3 733..843 CDD:238020 31/113 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3515
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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