DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and TUB4

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_013313.1 Gene:TUB4 / 850909 SGDID:S000004202 Length:473 Species:Saccharomyces cerevisiae


Alignment Length:481 Identity:142/481 - (29%)
Similarity:227/481 - (47%) Gaps:57/481 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ECISVHIGQAGVQIGNACWELYCLEHGIQPDG--HMPSDKTVGGGDDSFSTFFSETGAGKHVPRA 65
            |.|::..||.|..:|...|.....||.|..||  .:|...|  ..||....||.|....|..|||
Yeast     4 EIITLQAGQCGNHVGKFLWSQLAKEHAIGTDGLSQLPDSST--ERDDDTKPFFRENSRNKFTPRA 66

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVVLDRIRKLADQ 128
            :.:|.||:|:.:|. .|:|..|.|.......:  .|.|::|.| |.||....|.:|::|.|..|.
Yeast    67 IMMDSEPSVIADVE-NTFRGFFDPRNTWVASDGASAGNSWANG-YDIGTRNQDDILNKIDKEIDS 129

  Fly   129 CTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHT 193
            ....:||.:.||..||||||..|.|:|.|...|.||....:|::|| :.|..||:.||:||....
Yeast   130 TDNFEGFQLLHSVAGGTGSGLGSNLLEALCDRYPKKILTTYSVFPA-RSSEVVVQSYNTILALRR 193

  Fly   194 TLEHSDCAFMVDNEAIYDICRR-----NLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLT 253
            .:|.||...:.||.::.:|..:     |:|::     :.|:||..|:||:|.|:||...:...::
Yeast   194 LIEDSDATVVFDNASLLNISGKVFRNPNIDLQ-----HTNQLISTIISSVTNSIRFPSYMYSSMS 253

  Fly   254 EFQTNLVPYPRIHFPLATYAPVIS---VEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMAC 315
            ...:.|:|.|.:||...::.|..|   .:...|:..:..::.....:|:|.:|........|...
Yeast   254 SIYSTLIPSPELHFLSPSFTPFTSDYIHDDIAHKGHSSYDVMLDLLDPSNSLVSTAMNNPTYFNV 318

  Fly   316 CMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTV--------VPGGDLAKVQ 372
            .....|:|.|:.::.|:.  |.::.|:|..|..:...|.|..:.|.:        |.|       
Yeast   319 YNTIIGNVEPRQISRAMT--KLQQRIKFPSWSSSAMHVNIGRRSPYLPLQPNENEVSG------- 374

  Fly   373 RAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY-VGEGME-----EGEFAEAREDLAALEKD 431
               .||||.:.:...:....:.||.::||.||::.| ||:..:     :.||||:||.:.:|.:|
Yeast   375 ---MMLSNMSTVVNVFENACNTFDKVFAKGAFLNNYNVGDLFQSMQNVQDEFAESREVVQSLMED 436

  Fly   432 Y---------EEVGIDSTTELGEDEE 448
            |         ::|.:|....:||.||
Yeast   437 YVAAEQDSYLDDVLVDDENMVGELEE 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 140/479 (29%)
TUB4NP_013313.1 COG5023 2..456 CDD:227356 138/473 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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