Protein Alignment alphaTub85E and Tubb1

DIOPT Version :9

• Sequence 1: NP_524297.1
• Gene: alphaTub85E / 41183
• FlyBaseID: FBgn0003886
• Length: 449
• Species: Drosophila melanogaster
• Sequence 2: XP_003749686.1
• Gene: Tubb1 / 679312
• RGDID: 1589557
• Length: 452
• Species: Rattus norvegicus
• Alignment Length: 452
• Identity: 183/452 - (40%)
• Similarity: 266/452 - (58%)
• Gaps: 15/452 - (3%)

  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRA 65
            |||.:.:.|||.|.|||...||:...||||...|.......:  ..:..|.:::|....|:||||
  Rat     1 MREIVHIQIGQCGNQIGAKFWEVIGEEHGIDCAGSYCGTSAL--QLERISVYYNEAYGKKYVPRA 63

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCT 130
            |.|||||..:|.:|:.....||.|:..:.|...|.||:|:||||.|.|:::.|:|.:|:.::.|.
  Rat    64 VLVDLEPGTMDSIRSSRLGILFQPDSFVHGNSGAGNNWAKGHYTEGAELIETVMDVVRRESESCD 128

  Fly   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
            .||||.:.||.|||||||..:|||.::..:|..:....||:.|:|:||..||||||::|:.|..:
  Rat   129 CLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRILNSFSVMPSPKVSDTVVEPYNAVLSIHQLI 193

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |::|..|.:||||:||||.|.|.:..|||.:||.|:...:|.||.||||.|.||.||.:...|:|
  Rat   194 ENTDACFCIDNEALYDICFRTLRLTTPTYGDLNHLVSLTMSGITTSLRFPGQLNADLRKLAVNMV 258

  Fly   261 PYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVP 325
            |:||:||.:..:||:.:.....:..|:|||:|...|:..|.|..||||||:|:....::||.:..
  Rat   259 PFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQQMFDARNIMAACDPRRGRYLTVACIFRGKMST 323

  Fly   326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            |:|:..:.:|:|:.|..||:|.|...||.:...||        ..:..|...|.|.|||.|.:.|
  Rat   324 KEVDQQLLSIQTRNSNCFVEWIPNNVKVAVCDIPP--------RGLNMAATFLGNNTAIQELFTR 380

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEE-----VGIDSTTELGEDE 447
            :...|..|:.:|||||||..|||:..||.||..|:..|..:|::     .|::...|.||:|
  Rat   381 VSEHFSAMFRRRAFVHWYTSEGMDISEFGEAEADILDLVSEYQQFQDVRAGLEDIEEGGEEE 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
alphaTub85E	NP_524297.1	PTZ00335	1..448	CDD:185562	183/452 (40%)
Tubb1	XP_003749686.1	PTZ00010	1..428	CDD:240228	178/436 (41%)
		beta_tubulin	2..426	CDD:276956	177/433 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5023
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900