DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and tubb1

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_001313351.1 Gene:tubb1 / 558552 ZFINID:ZDB-GENE-110408-5 Length:466 Species:Danio rerio


Alignment Length:448 Identity:186/448 - (41%)
Similarity:271/448 - (60%) Gaps:11/448 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRA 65
            |||.:.:.|||.|.|||:..||:...||||...|....|..:  ..:..:.:|:|...||:||||
Zfish     1 MREIVHLQIGQCGNQIGSKFWEVISDEHGINRVGAYEGDMDL--QLERVNVYFNEAHGGKYVPRA 63

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCT 130
            :.|||||..:|.||.....|||.|:..|.|...|.||:|:||||.|.|:|:.|:||:|..|:.|.
Zfish    64 LLVDLEPGTMDSVRGSQIGQLFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRVRNEAESCD 128

  Fly   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
            .:|||...||.|||||||..:|::.::..:|..:....||:.|:|:||..||||||:.|:.|..:
Zfish   129 CMQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMNSFSVMPSPKVSDTVVEPYNATLSIHQLI 193

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |::|..:.:||||:||||.|.|.:..|||.:||.|:...:|.:|.||||.|.||.||.:...|:|
Zfish   194 ENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSLRFPGQLNADLRKLAVNMV 258

  Fly   261 PYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVP 325
            |:||:||.:..:||:.:.....:..|||.|:|...|:|.|.|..||||||:|:....::||.:..
Zfish   259 PFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDPRNMMTACDPRRGRYLTVAGIFRGRMST 323

  Fly   326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            |:|:..:..|:.|.|..||||.|...||.:...||        ..::.|...:.|.|||.|.:.|
Zfish   324 KEVDEQMLAIQQKNSNYFVDWIPHNVKVAVCDIPP--------RGLKMASTFIGNNTAIQEVFKR 380

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDEE 448
            :..:|.||:.::||:|||.||||:|.||:||..:|..|..:|::.. |:|.::..:||
Zfish   381 IGEQFALMFRRKAFLHWYTGEGMDELEFSEAESNLNDLVSEYQQYQ-DATADMDYEEE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 184/446 (41%)
tubb1NP_001313351.1 PTZ00010 1..433 CDD:240228 184/442 (42%)
beta_tubulin 2..426 CDD:276956 181/433 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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