DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and tubg1

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_957202.1 Gene:tubg1 / 393882 ZFINID:ZDB-GENE-040426-836 Length:451 Species:Danio rerio


Alignment Length:446 Identity:143/446 - (32%)
Similarity:237/446 - (53%) Gaps:28/446 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAV 66
            ||.|::.:||.|.|||...|:..|.||||.|:|.:....|  .|.|....||.:.....::||||
Zfish     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHYIPRAV 65

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVVLDRIRKLADQC 129
            .:||||.|:..:....|..|::||.:...:.  .|.||:|.| ::.|::|.:.:.|.|.:.||..
Zfish    66 LLDLEPRVIHTILNSPYANLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGS 129

  Fly   130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTHT 193
            ..|:||::.||..||||||..|.|:|||:..|.||....:|::| ..::|..||:||||:||...
Zfish   130 DSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKR 194

  Fly   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 258
            ..:::||..::||.|:..|....|.|:.|::..:|:|:..|:|:.|.:||:.|.:|.||.....:
Zfish   195 LTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIAS 259

  Fly   259 LVPYPRIHF------PLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGK---YMA 314
            |:|.||:||      ||.|...|.||.|.     ||.::.....:|.|.||.....|..   |:|
Zfish   260 LIPTPRLHFLMTGYTPLTTDQSVASVRKT-----TVLDVMRRLLQPKNVMVSTGRDRQTNHCYIA 319

  Fly   315 CCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
            ...:.:|:|.|..|:.::..|:.::...|:.|.|...:|.::.:.|.:.....::.:     |::
Zfish   320 ILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRRSPYLPSAHRVSGL-----MMA 379

  Fly   380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAE---AREDLAALEKDY 432
            |.|:|:..:.|...::|.:..:.||:..:..|.:.:..|.|   :||.:..|..:|
Zfish   380 NHTSISSLFERTCRQYDKLRKREAFLEQFRKEDIFKDNFDELDNSREVVQQLVDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 143/446 (32%)
tubg1NP_957202.1 gamma_tubulin 3..435 CDD:276957 142/444 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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