DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and betaTub56D

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster


Alignment Length:433 Identity:175/433 - (40%)
Similarity:258/433 - (59%) Gaps:17/433 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 WELYCLEHGIQPDG--HMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTY 83
            ||:...||||...|  |..||..:    :..:.:::|...||:|||||.|||||..:|.||:|.:
  Fly    30 WEIISDEHGIDATGAYHGDSDLQL----ERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPF 90

  Fly    84 RQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTGLQGFLVFHSFGGGTGSG 148
            .|:|.|:..:.|:..|.||:|:||||.|.|:||.|||.:||.|:.|..||||.:.||.|||||||
  Fly    91 GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSG 155

  Fly   149 FTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDIC 213
            ..:||:.::..:|..:....:|:.|:|:||..||||||:.|:.|..:|::|..:.:||||:||||
  Fly   156 MGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDIC 220

  Fly   214 RRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISV 278
            .|.|.:..|||.:||.|:...:|.:|..|||.|.||.||.:...|:||:||:||.:..:||:.|.
  Fly   221 FRTLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR 285

  Fly   279 EKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVPKDVNAAIATIKTKRSIQF 343
            ....:..|||.|:|...|:..|.|..||||.|:|:....::||.:..|:|:..:..|:.|.|..|
  Fly   286 GSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYF 350

  Fly   344 VDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY 408
            |:|.|...|..:...||        ..::.:...:.|:|||.|.:.|:..:|..|:.::||:|||
  Fly   351 VEWIPNNVKTAVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWY 407

  Fly   409 VGEGMEEGEFAEAR---EDLAALEKDYEEVGIDSTTELGEDEE 448
            .||||:|.||.||.   .||.:..:.|:|...|...|..|::|
  Fly   408 TGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEEQE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 174/431 (40%)
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 169/416 (41%)
PLN00220 29..438 CDD:215107 171/419 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443488
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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