DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub85E and gammaTub37C

DIOPT Version :10

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster


Alignment Length:442 Identity:138/442 - (31%)
Similarity:234/442 - (52%) Gaps:19/442 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVF 67
            |.|::.:||.|.|||...|:..||||||.|||.:....|  .|.|....||.:.....::||||.
  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPDGVLEDFAT--DGQDRKDVFFYQADDNHYIPRAVL 66

  Fly    68 VDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVVLDRIRKLADQCT 130
            :||||.|::.:.|..|.:|::.|.:...|.  .|.||:|.| ::.|:::.:.|.|.:.:.||...
  Fly    67 IDLEPRVINNIMTSPYSKLYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSD 130

  Fly   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTHTT 194
            .|:||::.||..||||||..|.::||||..:.||....:|::| ..::|..||:|||||||....
  Fly   131 SLEGFVLCHSIAGGTGSGMGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRL 195

  Fly   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259
            .:.:|...::||.|:..|....|.|:.||:..:|.|:..|:|..|.:||:...:|.:|.....:|
  Fly   196 TKCADSVVVLDNTALNRIATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASL 260

  Fly   260 VPYPRIHFPLATYAPVIS--VEKAYHEQLTVAEITNACFEPANQMVKC---DPRRGKYMACCMLY 319
            :|.|::||.:..|.|::|  ..|....:.||.::.....:|.|.||..   ...|..:::...:.
  Fly   261 IPTPQLHFLMTGYTPLMSDCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNII 325

  Fly   320 RGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAI 384
            :|:|.|..|:.::..|:.::...|:.|.|...:|.:....|.|.....::.:     |::|.|.|
  Fly   326 QGEVDPSQVHKSLQRIRERKLANFIPWGPASIQVALPRSSPYVQSAHKVSGL-----MMANHTGI 385

  Fly   385 AEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAE---AREDLAALEKDYE 433
            :..:.|...::|.:..:.||:..:..|.|.:.:..|   ||:.:..|.::||
  Fly   386 SSLFKRALAQYDKLRKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 138/442 (31%)
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 136/439 (31%)

Return to query results.
Submit another query.