DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub85E and tuba4l

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_956089.1 Gene:tuba4l / 327377 ZFINID:ZDB-GENE-030131-5588 Length:449 Species:Danio rerio


Alignment Length:448 Identity:396/448 - (88%)
Similarity:423/448 - (94%) Gaps:1/448 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRA 65
            ||||||:||||||:|:||:||||||||||.||||.: .|.:....|.||.||||||||||:||||
Zfish     1 MRECISIHIGQAGIQMGNSCWELYCLEHGFQPDGTI-VDSSRSLADSSFGTFFSETGAGKYVPRA 64

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCT 130
            ||:|||||||||:|.|.||||:||||||:||||||||||||||||||||||.||||:||:|||||
Zfish    65 VFIDLEPTVVDEIRNGHYRQLYHPEQLISGKEDAANNYARGHYTIGKEIVDSVLDRMRKMADQCT 129

  Fly   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
            ||||||:|||||||||||||||||||||||||||||||||:||||||||||||||||||||||||
Zfish   130 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTL 194

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |||||:||||||||:|||:||||||||:|.||||||.||||||||||||||||||||||||||||
Zfish   195 EHSDCSFMVDNEAIFDICKRNLDIERPSYTNLNRLIAQIVSSITASLRFDGALNVDLTEFQTNLV 259

  Fly   261 PYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVP 325
            |||||||||.||:|:||.||||||||:|.|||||||||||||||||||||||||||:||||||||
Zfish   260 PYPRIHFPLVTYSPIISAEKAYHEQLSVPEITNACFEPANQMVKCDPRRGKYMACCLLYRGDVVP 324

  Fly   326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            ||||||||.|||:||||||||||||||||||||||||||||||||||||||||||||||||||.|
Zfish   325 KDVNAAIANIKTRRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWGR 389

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDEE 448
            ||||||||||||||||||||||||||||:|||||:||||||||||..|||.:.|||||
Zfish   390 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVAADSTDDCGEDEE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 394/446 (88%)
tuba4lNP_956089.1 PTZ00335 1..449 CDD:185562 396/448 (88%)
alpha_tubulin 2..434 CDD:276955 385/432 (89%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 107 1.000 Domainoid score I6451
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.730

Return to query results.
Submit another query.