DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub85E and atb2

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_595106.1 Gene:atb2 / 2540936 PomBaseID:SPBC800.05c Length:449 Species:Schizosaccharomyces pombe


Alignment Length:449 Identity:339/449 - (75%)
Similarity:394/449 - (87%) Gaps:0/449 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRA 65
            |||.||:|:||||.||||||||||||||||||:|:|..:......|..|||||||||.||:|||:
pombe     1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRS 65

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCT 130
            ::|||||.|:|:||||.||.||||||||||||||:|||||||||:|||:||.|.|:||::||.|:
pombe    66 IYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNCS 130

  Fly   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
            |||||||||||||||||||.:||:|||:::|.|||||:||:||||||||:|||||||:||||.||
pombe   131 GLQGFLVFHSFGGGTGSGFGALLLERLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATL 195

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            :.:||.||||||:.|||||||||||||:|.||||||.|:||||||||||:|:|||||.|||||||
pombe   196 DLADCTFMVDNESCYDICRRNLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDLAEFQTNLV 260

  Fly   261 PYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVP 325
            |||||||||.||||::|..||:||..:|.||||.||||.|||||||||.|:|||.|:||||||:|
pombe   261 PYPRIHFPLVTYAPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRAGRYMATCLLYRGDVIP 325

  Fly   326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            :||.||:.|||.||:||||||||||||:||..:||..:.|.::|||.||||||||||:|||||:|
pombe   326 RDVQAAVTTIKAKRTIQFVDWCPTGFKIGICDRPPQHIEGSEIAKVDRAVCMLSNTTSIAEAWSR 390

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDEEY 449
            |||||||||:||||||||||||||||||:||||||||||:||||||.||......:|||
pombe   391 LDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMEVDYMEEEY 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 336/446 (75%)
atb2NP_595106.1 PTZ00335 1..448 CDD:185562 336/446 (75%)
alpha_tubulin 2..435 CDD:276955 330/432 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 346 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 727 1.000 Inparanoid score I91
OMA 1 1.010 - - QHG54134
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 1 1.000 - - mtm9275
orthoMCL 1 0.900 - - OOG6_100108
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
TreeFam 00.000 Not matched by this tool.
1110.870

Return to query results.
Submit another query.