DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and nda2

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_596774.1 Gene:nda2 / 2539864 PomBaseID:SPBC16A3.15c Length:455 Species:Schizosaccharomyces pombe


Alignment Length:455 Identity:342/455 - (75%)
Similarity:397/455 - (87%) Gaps:6/455 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGG----DDSFSTFFSETGAGKH 61
            |||.||||:|||||||||||||||||||||.|||....:..|...    :|.|.|||||||.||.
pombe     1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSETGQGKF 65

  Fly    62 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLA 126
            |||:::|||||.|:|:||||.|:.||||||::||||||:|||||||||:|||::|.||:|||::|
pombe    66 VPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRRMA 130

  Fly   127 DQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTT 191
            |.|:||||||||||||||||||..:||:|||:::|||||.|:||:||||||||:|||||||:|||
pombe   131 DNCSGLQGFLVFHSFGGGTGSGLGALLLERLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTT 195

  Fly   192 HTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQ 256
            |.||::|||.|||||||.|||||||||||||||.||||||.|:||||||||||.|:|||||.|||
pombe   196 HATLDNSDCTFMVDNEACYDICRRNLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNEFQ 260

  Fly   257 TNLVPYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRG 321
            |||||||||||||.||:|::|..||:||..:|.||||.||||.|||||||||.|:|||.|:||||
pombe   261 TNLVPYPRIHFPLVTYSPIVSAAKAFHESNSVQEITNQCFEPYNQMVKCDPRTGRYMATCLLYRG 325

  Fly   322 DVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAE 386
            ||:|:||.||:.:||::|:||||||||||||:||.|:||..|||..:|||.||||||||||:|||
pombe   326 DVIPRDVQAAVTSIKSRRTIQFVDWCPTGFKIGICYEPPQHVPGSGIAKVNRAVCMLSNTTSIAE 390

  Fly   387 AWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDS-TTELGE-DEEY 449
            ||:||||||||||:||||||||||||||||||:||||||||||:||||||.|| ..|:.| ||||
pombe   391 AWSRLDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALERDYEEVGQDSMDNEMYEADEEY 455

  Fly   450  449
            pombe   456  455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 339/452 (75%)
nda2NP_596774.1 alpha_tubulin 2..439 CDD:276955 330/436 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 346 1.000 Domainoid score I180
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 727 1.000 Inparanoid score I91
OMA 1 1.010 - - QHG54134
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 1 1.000 - - mtm9275
orthoMCL 1 0.900 - - OOG6_100108
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
TreeFam 00.000 Not matched by this tool.
1110.870

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