DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and Tubg1

DIOPT Version :10

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_665721.1 Gene:Tubg1 / 252921 RGDID:628606 Length:451 Species:Rattus norvegicus


Alignment Length:446 Identity:144/446 - (32%)
Similarity:239/446 - (53%) Gaps:28/446 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAV 66
            ||.|::.:||.|.|||...|:..|.||||.|:|.:....|  .|.|....||.:.....::||||
  Rat     3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFAT--EGTDRKDVFFYQADDEHYIPRAV 65

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVVLDRIRKLADQC 129
            .:||||.|:..:...:|.:|::||.:...:.  .|.||:|.| ::.|::|.:.:.|.|.:.||..
  Rat    66 LLDLEPRVIHSILNSSYAKLYNPENIYLSEHGGGAGNNWASG-FSQGEKIHEDIFDIIDREADGS 129

  Fly   130 TGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTHT 193
            ..|:||::.||..||||||..|.|:|||:..|.||....:|::| ..::|..||:||||:||...
  Rat   130 DSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKR 194

  Fly   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTN 258
            ..:::||..::||.|:..|....|.|:.|::..:|:|:..|:|:.|.:||:.|.:|.||.....:
  Rat   195 LTQNADCVVVLDNTALNLIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIAS 259

  Fly   259 LVPYPRIHF------PLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGK---YMA 314
            |:|.||:||      ||.|...|.||.|.     ||.::.....:|.|.||.....|..   |:|
  Rat   260 LIPTPRLHFLMTGYTPLTTDQSVASVRKT-----TVLDVMRRLLQPKNVMVSTGRDRQTNHCYIA 319

  Fly   315 CCMLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379
            ...:.:|:|.|..|:.::..|:.::...|:.|.|...:|.::.:.|.:.....::.:     |::
  Rat   320 ILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPYLPSAHRVSGL-----MMA 379

  Fly   380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAE---AREDLAALEKDY 432
            |.|:|:..:.|...:||.:..:.||:..:..|.:.:..|.|   :||.:..|..:|
  Rat   380 NHTSISSLFERTCRQFDKLRKREAFMEQFRKEDIFKDNFDEMDTSREIVQQLIDEY 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 144/446 (32%)
Tubg1NP_665721.1 gamma_tubulin 3..435 CDD:276957 143/444 (32%)

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