DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub85E and Tubb3

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_075768.1 Gene:Tubb3 / 22152 MGIID:107813 Length:450 Species:Mus musculus


Alignment Length:456 Identity:186/456 - (40%)
Similarity:272/456 - (59%) Gaps:21/456 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGD---DSFSTFFSETGAGKHV 62
            |||.:.:..||.|.|||...||:...||||.|.|:.     ||..|   :..|.:::|..:.|:|
Mouse     1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNY-----VGDSDLQLERISVYYNEASSHKYV 60

  Fly    63 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLAD 127
            |||:.|||||..:|.||:|.:..||.|:..|.|:..|.||:|:||||.|.|:||.|||.:||..:
Mouse    61 PRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECE 125

  Fly   128 QCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTH 192
            .|..||||.:.||.|||||||..:||:.::..:|..:....||:.|:|:||..||||||:.|:.|
Mouse   126 NCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIH 190

  Fly   193 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQT 257
            ..:|::|..:.:||||:||||.|.|.:..|||.:||.|:...:|.:|.||||.|.||.||.:...
Mouse   191 QLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAV 255

  Fly   258 NLVPYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGD 322
            |:||:||:||.:..:||:.:.....:..|||.|:|...|:..|.|..||||.|:|:....::||.
Mouse   256 NMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGR 320

  Fly   323 VVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEA 387
            :..|:|:..:..|::|.|..||:|.|...||.:...||        ..::.:...:.|:|||.|.
Mouse   321 MSMKEVDEQMLAIQSKNSSYFVEWIPNNVKVAVCDIPP--------RGLKMSSTFIGNSTAIQEL 377

  Fly   388 WARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGE-----DE 447
            :.|:..:|..|:.::||:|||.||||:|.||.||..::..|..:|::....:..|.||     ||
Mouse   378 FKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDDE 442

  Fly   448 E 448
            |
Mouse   443 E 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 184/454 (41%)
Tubb3NP_075768.1 PLN00220 1..447 CDD:215107 186/456 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 422..450 7/22 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.