DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment alphaTub85E and tbg-1

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_499131.1 Gene:tbg-1 / 176361 WormBaseID:WBGene00006540 Length:444 Species:Caenorhabditis elegans


Alignment Length:456 Identity:125/456 - (27%)
Similarity:225/456 - (49%) Gaps:42/456 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVD 69
            ::||:||.|.|:..|.|:....||||...|....:..:   :|.....|.:.....:|||||.||
 Worm     8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVD 69

  Fly    70 LEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVVLDRIRKLADQCTG 131
            |||.|:: .:::..:..||:.:.:.....  .|.||:|.| |..|:|:.:.::|.|.:.|:....
 Worm    70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNN 133

  Fly   132 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST-AVVEPYNSILTTHTTL 195
            |.|.|..||..||||||..|||:|||...:.||....:|::.....|| .||.|||.:|:....:
 Worm   134 LDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLI 198

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |:.|...::||.|::.:.......:.||:.::|.|:.:|:|:.||..||:.|:...:.  ..:|.
 Worm   199 ENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIR--YLDLA 261

  Fly   261 PYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPR---RGKYMACCMLYRGD 322
            |:|.:||..:..:||:...:.:..:.:||::|....:|.:.||....|   ....::..|..:|.
 Worm   262 PFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQ 326

  Fly   323 VVPKDVNAAIATIKTKRSIQFVDWCPTGF---KVGINYQP--PTVVPGGDLAKVQRAVCMLSNTT 382
            :....:..|      ::::.|....|..:   .:.:.:.|  |.|.|     :.:.:..:|:|:|
 Worm   327 IEAHTIMTA------EQNVDFAIRRPPFYMLKPLRMMHAPLSPYVRP-----QYKVSGLLLNNST 380

  Fly   383 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFAEAREDL-----AALEKDYEEVG 436
            ::|..:..|..|:|.:.:||||:..:  |.::.      .:.....:||     |.::|||...|
 Worm   381 SVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDLLDEYKAVVQKDYLTRG 443

  Fly   437 I 437
            :
 Worm   444 L 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 125/456 (27%)
tbg-1NP_499131.1 gamma_tubulin 5..431 CDD:276957 120/441 (27%)
PLN00222 7..443 CDD:215108 124/453 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.