DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and tbg-1

DIOPT Version :10

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_499131.1 Gene:tbg-1 / 176361 WormBaseID:WBGene00006540 Length:444 Species:Caenorhabditis elegans


Alignment Length:456 Identity:125/456 - (27%)
Similarity:225/456 - (49%) Gaps:42/456 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVD 69
            ::||:||.|.|:..|.|:....||||...|....:..:   :|.....|.:.....:|||||.||
 Worm     8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPRAVLVD 69

  Fly    70 LEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDVVLDRIRKLADQCTG 131
            |||.|:: .:::..:..||:.:.:.....  .|.||:|.| |..|:|:.:.::|.|.:.|:....
 Worm    70 LEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDIIIREAENTNN 133

  Fly   132 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVST-AVVEPYNSILTTHTTL 195
            |.|.|..||..||||||..|||:|||...:.||....:|::.....|| .||.|||.:|:....:
 Worm   134 LDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDVVVHPYNWVLSMQRLI 198

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |:.|...::||.|::.:.......:.||:.::|.|:.:|:|:.||..||:.|:...:.  ..:|.
 Worm   199 ENPDHVVVLDNAALHRLAAGKFKTDTPTFDHINSLVARIMSTSTAPYRFNSAMCPSIR--YLDLA 261

  Fly   261 PYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPR---RGKYMACCMLYRGD 322
            |:|.:||..:..:||:...:.:..:.:||::|....:|.:.||....|   ....::..|..:|.
 Worm   262 PFPPMHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQGQ 326

  Fly   323 VVPKDVNAAIATIKTKRSIQFVDWCPTGF---KVGINYQP--PTVVPGGDLAKVQRAVCMLSNTT 382
            :....:..|      ::::.|....|..:   .:.:.:.|  |.|.|     :.:.:..:|:|:|
 Worm   327 IEAHTIMTA------EQNVDFAIRRPPFYMLKPLRMMHAPLSPYVRP-----QYKVSGLLLNNST 380

  Fly   383 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEE------GEFAEAREDL-----AALEKDYEEVG 436
            ::|..:..|..|:|.:.:||||:..:  |.::.      .:.....:||     |.::|||...|
 Worm   381 SVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDLLDEYKAVVQKDYLTRG 443

  Fly   437 I 437
            :
 Worm   444 L 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 125/456 (27%)
tbg-1NP_499131.1 gamma_tubulin 5..431 CDD:276957 120/441 (27%)

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