DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and mec-12

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_497663.1 Gene:mec-12 / 175419 WormBaseID:WBGene00003175 Length:450 Species:Caenorhabditis elegans


Alignment Length:450 Identity:409/450 - (90%)
Similarity:432/450 - (96%) Gaps:1/450 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRA 65
            |||.||:|||||||||||||||||||||||||||.|||||::||.||||||||||||:|:|||||
 Worm     1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRHVPRA 65

  Fly    66 VFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCT 130
            |.|||||||:||:||||||.|||||||||||||||||||||||||||||:|:.|||||:|||.||
 Worm    66 VMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCT 130

  Fly   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
            ||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||||||
 Worm   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195

  Fly   196 EHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260
            |||||:|||||||||||||||||||||:|.|||||||||||||||||||||||||||||||||||
 Worm   196 EHSDCSFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLV 260

  Fly   261 PYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVP 325
            |||||||||||::||||.||||||||:||||||.||||.|||||||||.|||||.|:|:||||||
 Worm   261 PYPRIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDVVP 325

  Fly   326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAR 390
            ||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||
 Worm   326 KDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTAIAEAWAR 390

  Fly   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGED-EEY 449
            ||||||||||||||||||||||||||||:|||||||||||||||||:||..:.||: :||
 Worm   391 LDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSMEDNGEEGDEY 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 407/447 (91%)
mec-12NP_497663.1 PTZ00335 1..448 CDD:185562 407/446 (91%)
alpha_tubulin 2..435 CDD:276955 399/432 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 410 1.000 Domainoid score I350
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H128229
Inparanoid 1 1.050 860 1.000 Inparanoid score I214
Isobase 1 0.950 - 0 Normalized mean entropy S25
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 1 1.000 - - otm14744
orthoMCL 1 0.900 - - OOG6_100108
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.730

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