DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and tba-6

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:NP_492419.2 Gene:tba-6 / 172717 WormBaseID:WBGene00006532 Length:464 Species:Caenorhabditis elegans


Alignment Length:448 Identity:352/448 - (78%)
Similarity:403/448 - (89%) Gaps:0/448 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RECISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAV 66
            ||.||:|:||||||||||||||:||||||||||:...|.|.....::.:|||:||..||||||.:
 Worm     8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCL 72

  Fly    67 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRIRKLADQCTG 131
            ||||||||||||||||||.|||||||::|||||||.||||.||||:|::|||:||:::||:.|.|
 Worm    73 FVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNG 137

  Fly   132 LQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLE 196
            ||||::||||||||||||.||||||||.:||||.||||:|||||||||::||||||||.||||||
 Worm   138 LQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLE 202

  Fly   197 HSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVP 261
            ||||.|||||||||||||||||:.||||.|||||:.||:|||||||||:||||||||||||||||
 Worm   203 HSDCTFMVDNEAIYDICRRNLDLARPTYTNLNRLVAQIISSITASLRFEGALNVDLTEFQTNLVP 267

  Fly   262 YPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVPK 326
            ||||||||.||||::|.|:|.|||.||:::|:|||||..||||||||||||||.|:|||||||||
 Worm   268 YPRIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDVVPK 332

  Fly   327 DVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL 391
            |:|:|||.:||||::|||:|||||||||||||||||||||||.|..|:|||:|||||||||||||
 Worm   333 DINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTAIAEAWARL 397

  Fly   392 DHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDEEY 449
            |||||||||||||||||||||||||||:|||||:|||||||||:|.|...:..:|:.|
 Worm   398 DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEIGEDELPDDIDDQSY 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 351/445 (79%)
tba-6NP_492419.2 PTZ00335 8..453 CDD:185562 350/444 (79%)
alpha_tubulin 8..441 CDD:276955 347/432 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S25
OMA 1 1.010 - - QHG54134
OrthoDB 1 1.010 - - D275336at33208
OrthoFinder 1 1.000 - - FOG0000082
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100108
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X95
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.780

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