DRSC/TRiP Functional Genomics Resources

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Protein Alignment alphaTub85E and tubz1

DIOPT Version :9

Sequence 1:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster
Sequence 2:XP_002941372.1 Gene:tubz1 / 100492972 XenbaseID:XB-GENE-5900222 Length:422 Species:Xenopus tropicalis


Alignment Length:492 Identity:108/492 - (21%)
Similarity:179/492 - (36%) Gaps:135/492 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ISVHIGQAGVQIGNACWELYCLEHGIQPDGHMPSDKTVGGGDDSFSTFFSETGAGKHVPRAVFVD 69
            |.:.:||.|.|||...|.|.|                ....|.....:||..|    :..|:.||
 Frog     4 IWLQVGQCGNQIGQEWWHLLC----------------NNASDTDRYPYFSRDG----MINAICVD 48

  Fly    70 LEPTVV----DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIG----KEIVDVVLDRIRKLA 126
            .||.|:    ..|:.|:.|.    ..||.|::...||:|.|:...|    |.::...::..|...
 Frog    49 SEPKVIRKLWKRVKKGSLRD----SNLIVGRKGRGNNWAFGYSGDGTDTEKSLLARTMESFRHEL 109

  Fly   127 DQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEP------- 184
            ::.....|.::.||..||||||..:.|.|.:.           ..|||..:.:..|.|       
 Frog   110 ERRDCYSGTVLLHSLCGGTGSGLGARLCEEIR-----------DTYPAGHILSVAVAPHETGDTP 163

  Fly   185 ---YNSILTTHTTLEHSDCAFMVDNEAIYDICRRNL-----------DIERP-TYMNLNRLIGQI 234
               |||:|.......:||...:..|:   ||..|..           .:|.| :...:|..|...
 Frog   164 LQHYNSLLCLSWLQRYSDGILLFQND---DIMHRVAALGEKKVPLVSGVEAPVSIAAMNSHIASC 225

  Fly   235 VSSI---TASLRFDGALNVDLT--EFQTNLVP-------------------YPRIHFPLATYAPV 275
            ::.:   |.:||...|::|.:.  |....|.|                   :.|:...|....|.
 Frog   226 LAGLLYPTNTLRTRSAVSVGIEPWEIIRTLCPMTTLKFLHTAQICRRGTPFWDRVTLSLTKNIPR 290

  Fly   276 ISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCMLYRGDVVPKDVNAAIATIKTKRS 340
            .|.:...|...::..::.|..:..                 .|...|.|         .:|.|:|
 Frog   291 TSPDGRLHHSTSLLAVSRASQDKP-----------------FLLSQDSV---------LMKLKQS 329

  Fly   341 IQFVDWCP------TGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY 399
            .:.|.|.|      ||.:   |...|        ::...::.:.:|.::.|:..:|:..:...||
 Frog   330 YRCVPWNPFPIDYWTGSQ---NILDP--------SQQSHSLTVCANHSSAADLMSRVIQRAQSMY 383

  Fly   400 AKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVG 436
            ..||::|||...|.||.:|..|...|.::.::|.::|
 Frog   384 EARAYLHWYQRYGCEEEDFQGAFHTLHSVVEEYNKLG 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 108/492 (22%)
tubz1XP_002941372.1 delta_zeta_tubulin-like 2..417 CDD:276958 106/487 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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