DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FoxP and Foxp4

DIOPT Version :9

Sequence 1:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_017173175.1 Gene:Foxp4 / 74123 MGIID:1921373 Length:692 Species:Mus musculus


Alignment Length:371 Identity:162/371 - (43%)
Similarity:201/371 - (54%) Gaps:68/371 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 HPLFAHGICRWPGCEMDLEDITSFVKHLNTEHGLDDRSTAQARVQMQVVSQLESHLQKERDRLQA 219
            |||:.||.|:|||||...||:..|:|||||||.||||||||.|||||||.|||..|.||.:||||
Mouse   307 HPLYGHGECKWPGCETLCEDLGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKESERLQA 371

  Fly   220 MMHHLYLS-------KQLLSPTKIDRKDVPGREGKFCRSPLTVNSIGRPIRQTNSP-------SP 270
            ||.||::.       .|...|.......||| ...|  |.:||::...|....:.|       :|
Mouse   372 MMAHLHMRPSEPKPFSQPHLPHCSQLNPVPG-SSSF--SKVTVSADPFPDGLVHPPTSAAAPVTP 433

  Fly   271 LNLPMVNSTNLCS---IKKRNHDKNTFSINGGLPYMLERAGLDVQQEIHRNREFYKNADVRPPFT 332
            |..|.:.|.:|.|   .::|::||....|:               .|:.:|.|||||||||||||
Mouse   434 LRPPGLGSASLHSGGPARRRSNDKFCSPIS---------------SELAQNHEFYKNADVRPPFT 483

  Fly   333 YASLIRQAIIDSPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAIRTNLSLHKCFVRYEDDFGSFW 397
            |||||||||:::||:|||||||||||...|.|||||.||||||:|.||||||||||.|:..|:.|
Mouse   484 YASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVW 548

  Fly   398 MVDDNEFVKRRHLSRGRPRKYEPS-----------------SSPNSCQSGNGVPTDKNPCDNCTQ 445
            .||:.|:.||      ||.|...|                 :|..:..:.:..|...||      
Mouse   549 TVDEREYQKR------RPPKMTGSPTLVKNMISGLSYGALNASYQAALAESSFPLLSNP------ 601

  Fly   446 HCTSLPPGADNPLDSNNPNDLGRIG-CLPYCGSDGLSKAS-KDYSN 489
              ..|.||:.:.|...:..|||..| .||..||....:.| ..||:
Mouse   602 --GMLNPGSASSLLPLSQEDLGVPGEPLPSNGSSSPPRLSPPQYSH 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:292777 46/66 (70%)
FH 328..400 CDD:238016 53/71 (75%)
Foxp4XP_017173175.1 FOXP-CC 309..376 CDD:374402 46/66 (70%)
COG5025 <375..>572 CDD:227358 95/220 (43%)
FH 479..551 CDD:214627 53/71 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5382
eggNOG 1 0.900 - - E2759_KOG4385
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001519
OrthoInspector 1 1.000 - - otm43440
orthoMCL 1 0.900 - - OOG6_103982
Panther 1 1.100 - - O PTHR45796
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4064
SonicParanoid 1 1.000 - - X957
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.800

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