DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxP and Foxj2

DIOPT Version :10

Sequence 1:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster
Sequence 2:XP_006237373.1 Gene:Foxj2 / 502886 RGDID:1565101 Length:623 Species:Rattus norvegicus


Alignment Length:218 Identity:70/218 - (32%)
Similarity:106/218 - (48%) Gaps:35/218 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 DVRPPFTYASLIRQAIIDSPDKQLTLNEIYNWFQNTFCYFRRNAATWKNAIRTNLSLHKCF---V 387
            |.:|.::||:||..||..||.|::||:|||.|..:.|.|::.....|||:||.||||:|||   .
  Rat   104 DGKPRYSYATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVP 168

  Fly   388 RYEDD--FGSFWMVDDNEFV--KRRH-----LSRGRPRKYEPSSSPNSCQSGNG---VPTDKNPC 440
            |..||  .||:|.:|....:  ||||     ||:..|.: |.|.||.....|:|   :..:.|| 
  Rat   169 RPRDDPGKGSYWTIDTCPDISRKRRHPPDDDLSQDSPEQ-EASKSPRGGVPGSGEASLSHEGNP- 231

  Fly   441 DNCTQHCTSLPPGADNPLDSNNPNDLGRIGCLPYCGSDG--LSKASKDYSNMDSGMIESNSHLTI 503
            ....|..:|:...:..|    .|.|.|.:.    .|:.|  .::.:....|.:.....|.|.:..
  Rat   232 QMSLQSPSSMASYSQGP----GPVDGGAVA----AGAPGQESTEGAPPLYNTNHDFKFSYSEINF 288

  Fly   504 DEYS---TNMYE-----SSANEH 518
            .:.|   .|:|:     ||:::|
  Rat   289 QDLSWSFRNLYKSMLERSSSSQH 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:465036
FH_FOX 327..408 CDD:469596 38/87 (44%)
Foxj2XP_006237373.1 COG5025 <33..290 CDD:227358 64/195 (33%)
FH_FOXJ2 105..186 CDD:410825 37/80 (46%)
Blue background indicates that the domain is not in the aligned region.

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