DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxP and fkh-6

DIOPT Version :10

Sequence 1:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_494775.1 Gene:fkh-6 / 181907 WormBaseID:WBGene00001438 Length:323 Species:Caenorhabditis elegans


Alignment Length:251 Identity:64/251 - (25%)
Similarity:109/251 - (43%) Gaps:73/251 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   300 LPYMLERAGLDVQQEIHRNREFYKNADVRPPFTYASLIRQAIIDSPDKQLTLNEIYNWFQNTFCY 364
            ||:.:.:.|               |:..:||::|.:||..||..||||::|||:||.:.:..|.|
 Worm     8 LPFHIVQEG---------------NSIDKPPYSYVALIAMAIDASPDKRMTLNQIYKFIEAKFPY 57

  Fly   365 FR----RNAATWKNAIRTNLSLHKCFVR--------YEDDFGSFW-MVDDN--EF----VKRRHL 410
            :|    :....|:|:||.||||:.|||:        ..|..|::| ||.||  :|    .|||.:
 Worm    58 YRDADAKRKQGWQNSIRHNLSLNDCFVKKARDGQSCANDRKGNYWQMVADNAPQFDNGNFKRRRV 122

  Fly   411 SRGRPRKYEPSSSPNSCQSG----------NGVPTDKNPCDNCTQHCTSLPP-------GADNPL 458
            .|....|...:::..:.::|          ||:   |.|     |:..::.|       ..::..
 Worm   123 KRLGIGKMGYANTTETTETGTILQQQLPFFNGL---KWP-----QNIQTMDPFQFFKFQYPNSIT 179

  Fly   459 DSNNPNDLGRIGCLPYCGSDGLSKASKDYSNMDSGMIESNSHLTIDEYSTNMYESS 514
            ||.|.:.              ::.:|...|:.|:.:..|...:....:.||:...|
 Worm   180 DSANTSQ--------------INNSSSSSSSFDTSIYTSAFPIPTSHFDTNLVAPS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:465036
FH_FOX 327..408 CDD:469596 39/99 (39%)
fkh-6NP_494775.1 FH_FOXL2 21..116 CDD:410802 38/94 (40%)
Blue background indicates that the domain is not in the aligned region.

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