DRSC/TRiP Functional Genomics Resources

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Protein Alignment FoxP and Foxa1

DIOPT Version :10

Sequence 1:NP_001247011.1 Gene:FoxP / 41182 FlyBaseID:FBgn0262477 Length:520 Species:Drosophila melanogaster
Sequence 2:NP_032285.2 Gene:Foxa1 / 15375 MGIID:1347472 Length:468 Species:Mus musculus


Alignment Length:333 Identity:87/333 - (26%)
Similarity:122/333 - (36%) Gaps:89/333 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   242 PGREGKFCRSPLT-VNSIG------RPIRQTNSPSPLNLPMVNSTNLCSIKKRNHDKNTFSINGG 299
            ||..|.....|.| :|.:|      .|.....:.:|.||....:..       ..|..||     
Mouse   110 PGGMGSMGAQPATSMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGG-------GGDAKTF----- 162

  Fly   300 LPYMLERAGLDVQQEIHRNREFYKNADVRPPFTYASLIRQAIIDSPDKQLTLNEIYNWFQNTFCY 364
                               :..|.:|  :||::|.|||..||..:|.|.|||:|||.|..:.|.|
Mouse   163 -------------------KRSYPHA--KPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPY 206

  Fly   365 FRRNAATWKNAIRTNLSLHKCFVRY-----EDDFGSFWMV---DDNEFVKRRHLSRGRPRKYE-- 419
            :|:|...|:|:||.:||.:.|||:.     :...||:|.:   ..|.|....:|.|.:..|.|  
Mouse   207 YRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271

  Fly   420 -----------PSSSPNSCQ--SGNGVPTDKNPCDNCTQHCTSLPPGADNPLDSNNPNDLGRIGC 471
                       ....|.|.:  ||.|.|:.::|.........|...||..|..:.:|..|...|.
Mouse   272 PGAGGGSGGGGSKGGPESRKDPSGPGNPSAESPLHRGVHGKASQLEGAPAPGPAASPQTLDHSGA 336

  Fly   472 LPYCGSDGL-SKASKDYSNMDSG-----------------MIESNSHLTID-EYS-------TNM 510
            ....|:..| |.||.....:.||                 ..||..||..| .||       .|:
Mouse   337 TATGGASELKSPASSSAPPISSGPGALASVPPSHPAHGLAPHESQLHLKGDPHYSFNHPFSINNL 401

  Fly   511 YESSANEH 518
            ..||..:|
Mouse   402 MSSSEQQH 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FoxPNP_001247011.1 FOXP-CC 157..224 CDD:465036
FH_FOX 327..408 CDD:469596 35/88 (40%)
Foxa1NP_032285.2 Forkhead_N 17..169 CDD:369872 15/89 (17%)
FH_FOXA1 157..268 CDD:410812 42/136 (31%)
Essential for DNA binding 251..288 6/36 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..396 29/126 (23%)
HNF_C 393..457 CDD:430552 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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