DRSC/TRiP Functional Genomics Resources

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Protein Alignment hyd and magi2a

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:NP_001314782.1 Gene:magi2a / 564112 ZFINID:ZDB-GENE-050810-4 Length:1503 Species:Danio rerio


Alignment Length:566 Identity:102/566 - (18%)
Similarity:177/566 - (31%) Gaps:220/566 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   485 WGVLPFDQRRFLWDKFRTKTKKPFKVVATDINVGAQVIMKKCPMYQSGSIG-------------- 535
            |.|:     |...|..|.|..|...||..|:.   |.:..:   :|.||:.              
Zfish    87 WAVV-----RHCKDPVRFKCVKQGGVVDKDLR---QYLNLR---FQKGSLDHELQQIIRDNLYLR 140

  Fly   536 -FTCSNGVPKVGQLLNSVWTFTDVCRMKIININTNSGVDKSQAAGNNLNAHGITPDKDLPKSTAM 599
             ..|:...|:.|::....:.|..|.|  .:.:..:..:.:|....:|.  :|      .||..|.
Zfish   141 TVPCTTRQPREGEVPGVDYNFVTVER--FVELERSGALLESGTYEDNY--YG------TPKPPAE 195

  Fly   600 PS--------------TGSSKNGQSFSNSKESTDRIDMPPPP----------------SPASSTC 634
            ||              |.:|:..:..:.|..:.::..:.||.                :|.||..
Zfish   196 PSPLLLNVAEQLLPGATPTSQGKRRRNKSVSNMEKAGIEPPEEEEEERPVINGNGVAITPESSEH 260

  Fly   635 SDTG-------SVTSHKRTKRATTKEDSNAPQEGRKDEELWEVKDVVFVEDKVGPV--------- 683
            .|..       :.|....|.....|||:..|:...|.:|          .|::||:         
Zfish   261 EDKSTDASGEMATTCPSETSTDAPKEDTEPPKSPPKPDE----------NDELGPLPDNWEMAYT 315

  Fly   684 --GKVLKVDGDFVAVRFPAINAAAVAAAAAATSSTS----NTASTSK--EEGKEDD----WQQC- 735
              |:|..:|.:                    |.:||    ..|..:|  ||.||::    |::. 
Zfish   316 EKGEVYFIDHN--------------------TKTTSWLDPRLAKKAKPPEECKENELPYGWEKID 360

  Fly   736 ---------------------------RLLRREDVQ-----------IFR-TAMSTRGP-----D 756
                                       ||..::.:|           ::| ..:.||.|     .
Zfish   361 DPIYGTYYVDHINRRTQFENPVLEAKRRLQHQQQMQSQGLSSLPLPAVYREKPLFTRDPTQLKGS 425

  Fly   757 WLQKQPKKIN-------VGGDAAG--AQILTLAVDSRGIHVIKKVLGKIHYSLYNLYNCKQEQNC 812
            :|....:|.|       :|||...  .|:.::..|.......|...|.:...:.::        |
Zfish   426 FLSTPLQKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMATGDVIVYINDV--------C 482

  Fly   813 LFPTDCNSFIGSTPGNILMACNDDCSGNSSTIVLRDGNGALYPL---AKDCLGSIKDPQWFDLPP 874
            :        :|:|..:::........|.|.|:||..|    |||   .:|...::..|       
Zfish   483 V--------LGTTHADVVKLFQSVPIGQSVTLVLCRG----YPLPYDPEDAANTLLSP------- 528

  Fly   875 VKSITMSTISLPAMLSGVN----LKSKVCMTALLFD---TQKLMPH 913
                 :..|..|.:::|.|    ....:..||...|   |..:.||
Zfish   529 -----LGLIDRPLLVNGRNSYDSYMEYISRTARFVDPLQTTMVQPH 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562
PolyA 2498..2561 CDD:197769
HECTc 2589..2885 CDD:238033
HECTc 2589..2884 CDD:214523
magi2aNP_001314782.1 PDZ_signaling 25..100 CDD:238492 5/17 (29%)
NK 122..286 CDD:302627 27/173 (16%)
WW 307..337 CDD:238122 6/49 (12%)
WW 352..381 CDD:278809 1/28 (4%)
PDZ 431..511 CDD:214570 17/95 (18%)
PDZ 595..676 CDD:214570
PDZ 762..856 CDD:214570
PDZ_signaling 920..1007 CDD:238492
PDZ_signaling 1182..1262 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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