DRSC/TRiP Functional Genomics Resources

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Protein Alignment hyd and LOC556872

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:XP_021334149.1 Gene:LOC556872 / 556872 -ID:- Length:1472 Species:Danio rerio


Alignment Length:1395 Identity:265/1395 - (18%)
Similarity:433/1395 - (31%) Gaps:507/1395 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   966 DSPPDSPSGGVEKKSLVGLSVARSIPTVSTSAYVSSI-AFGASASSSNENSSFATMSSSAAGSAS 1029
            ||||.|..   |.::|:     |:..|.|.|  :|:: ..|....:|.|:|.   :|..:||::|
Zfish   196 DSPPISYQ---EHRNLL-----RNFRTRSKS--LSNLEKAGEEGDNSEEDSG---LSGGSAGASS 247

  Fly  1030 ----STSRDNRTNLRDMMNRLINSDQAEQSGSQPMATNNEDHAYIPWPAETPAASNLSASSSQNV 1090
                ::|.....|||......:.:....:.|::...:.|.:..|             |.|.:...
Zfish   248 VPVHTSSPSQSRNLRGGNTSALENGLGPRRGARVRGSENWEMMY-------------SDSGNAYY 299

  Fly  1091 SDSIEDDISKIIPSSSQSSMLSNIKLGSPTYTFDLAQRREH------------------ALTILQ 1137
            .|      ..:.|||  ||.|:               ||.|                  :||.||
Zfish   300 KD------HHLKPSS--SSWLN---------------RRAHSRDNVCMPEYISHSCIWQSLTDLQ 341

  Fly  1138 QMCVSPA--------LRPYLCHMLSTKDAQGQTPFMLSVSCRAYEAGIILLNTILMLSEQDPQLK 1194
            ..||..|        ||.:..|....|.|:| ..|.:....|..|        .|.:....|   
Zfish   342 SQCVQVAEFTDQPSELRGFSVHTRLVKGARG-FGFNIVGGSRRRE--------FLQIYSITP--- 394

  Fly  1195 EAMIFPNGSPADQSPLHVICY-NDTCSFTWTGADHINQNIFECKTCGLTGSLCCCTECARVCHKG 1258
                   |.|:..:...::.| ||||...::..|.:                    |..:....|
Zfish   395 -------GGPSTLNTADILVYINDTCVLGYSHKDVV--------------------EMLKAIPIG 432

  Fly  1259 H--DCKLKRTAPTAYCDCWEKCKCKALIAGNLTKRFALLCKLVSCTDLVTKFNSKGESILLFLIQ 1321
            |  |..::|..|..|    ....|..:....||.                   |:.:|..|....
Zfish   433 HTVDIMVRRGYPMLY----NSEGCPKMSNPRLTA-------------------SQNQSPHLPPPT 474

  Fly  1322 TVGRQIVEQRQY-------------------RFSVRVRNVSTAATGATGNNSVISN--RKTSAAE 1365
            |...|......|                   ..::||| .|..:..|.||:...::  |..|:.:
Zfish   475 TTQPQAQAPLPYAQLHLNHNSPPWADFDRGSSRNLRVR-ASRFSLDANGNSPPFASPPRPPSSYQ 538

  Fly  1366 IDNDMPDHDLEPPKFARKALERLLIDWNAVRSMIMSGAERGDVPNPAGSASENSNSEGFNMFIQT 1430
            ..|......|.||:.|| ::.||       :|..::.....:|.:..||...:        ||:.
Zfish   539 GSNGYGSGFLRPPRTAR-SIRRL-------QSAELASQSDSEVVSAIGSHRAS--------FIRN 587

  Fly  1431 QHGSTL-------LDKFTHSLIVKCTSDHLDTLLLTLVRELQNASVSNRSKEAEEVVRRFVRSVA 1488
            .:.::|       |..|                         .:|.|:.|......:.|      
Zfish   588 HNNNSLSTPPPLRLHSF-------------------------KSSESDLSSSTPPPISR------ 621

  Fly  1489 RVFVIFNLEKQPNP-------EKRKSHSSCNKYVQSCVKVFQTLHKISIEELCEVSEALIAPVRL 1546
              ..:.:.|..|.|       .:|.||                        |.:...:::.|.  
Zfish   622 --LPLPHTELSPGPVSFSPGGGRRYSH------------------------LRKPQNSMLTPP-- 658

  Fly  1547 GVVRPTAPF-----TMSSSNLDVRNSDDLFSVDPLAPSNVESPSEQILVHDAGNDQSANFNIQQN 1606
            ..|....|:     |.|:|           |..|  .|::.||.....|..:|....|     ..
Zfish   659 SSVHSDGPYFTFNGTASAS-----------SGSP--NSSIPSPGALSAVIGSGVGGMA-----AG 705

  Fly  1607 YDVVAMETIRDASESEEVINREANSHNQDDELIE---NQRNEDGMQDDESDNDFTFNDAETESDS 1668
            .::|.:...:....|....:..|..|.....|::   :.|..:|:|  ..|.....|.|:.:|  
Zfish   706 GELVPVALAKCERGSNMGFSVTAGGHGGRQTLVKKVWDHRQCNGLQ--SGDAVVKINGADVQS-- 766

  Fly  1669 DDNQSNQEVQRSVQAGATVGSENDIGVLFLEDESGDSSAQEEDGSEDGESDDQSDEFNFNEQQLE 1733
               .|..:|||.:|.....|   ::.:|.....|..|                      |.....
Zfish   767 ---LSFAQVQRILQEHTKKG---EVILLVYRGPSNYS----------------------NSPSSV 803

  Fly  1734 RRSTNSNARSDLAPQTMQWAIRSRDTARSSVRVPTGSNMVFIDPMALRRSTVPASTTVTTPSIEP 1798
            ||.|....||                 .|...||      |.|.|.|.|:           |:.|
Zfish   804 RRLTPPPPRS-----------------ASDSEVP------FTDSMPLSRN-----------SLTP 834

  Fly  1799 HTMATTASNLARAFGITIRQISELISILSYNVLNDIETSLKIQNDEAIAVQ---AFVEKRLKATW 1860
            .:.|...|:|                :.|.:.|:.:..:|.::..:.::.:   ..:..|:|...
Zfish   835 PSPALVRSSL----------------VQSTSFLDSVPVTLTLEPRDWMSSEDGGTVLSPRVKTEE 883

  Fly  1861 DWMFTVMDGTEAQLK------FGAYLTNYTDPN--------HPLHPLNLSAQASSSQTPAPATS- 1910
            ......:.|.|.:||      ||..:.:....|        |....:...:.|:.|....|... 
Zfish   884 KEQPPALRGYEVELKRKPGEGFGFVIASQDVENVKAVSLLPHRFVTVRRGSPAARSGQIRPGDRL 948

  Fly  1911 SSVNG---VNI----MGSNSRRDFFTYCLSLM---RSHTSEHRD------------ALPVLDITA 1953
            .:|:|   ||:    :....||...|..|:::   .:|:||..|            :.|..|.| 
Zfish   949 EAVDGRSVVNLPHRELAQILRRAGNTLRLTIVPRASAHSSERADYDPDYKNRKTHKSKPKQDAT- 1012

  Fly  1954 LRHIAYVLD----AFVYYMRNDS----GFYDKQDTISGRINNLSPMTESY--DTDDELANLEEFN 2008
             |:.:..|:    .|.:.:|..|    |.|     :.|.:.. .|.:.|:  ...|:|.   |.|
Zfish  1013 -RYYSVELERGPTGFGFSLRGGSEYNMGLY-----VLGLMEG-GPASRSHKIQVSDQLV---EIN 1067

  Fly  2009 ADVQMSASSMPSGSQ--------GTRRHAFFARSESTLSLGCSAPEGFELPLDMAMPLADKPHLL 2065
            .|   ||:.| :.||        |:|.|..|.|.           .|:       :|..|:.|:.
Zfish  1068 GD---SAAGM-THSQAVEQIRTGGSRIHLVFKRG-----------NGY-------VPDYDRDHIT 1110

  Fly  2066 QPNSKRQELFANLPLL--------VTTNANNSGATNDG--------DGGSIFDYTPTRL-GFSNS 2113
            ..:|..|.|.:||..:        .|::......||.|        |||.  ..:|.|| |....
Zfish  1111 AVSSSPQPLQSNLAAVSHHRPQRDATSSLQKPEKTNRGWKEPRERSDGGD--RESPARLKGDRQG 1173

  Fly  2114 LKRNERVYE------TVPIDSSKTGDGNVTNKAEGSTDSNIYVQLKKKQGSDDFKSHKEADGNQS 2172
            .:|..|..|      ::|           .|.....:|.::.|:..::.|.:..|      ||:.
Zfish  1174 RRRRSRDDERRRRSYSLP-----------RNTPRRHSDESMKVEKVERNGREMEK------GNKR 1221

  Fly  2173 KYEKVVLMETDDSLPSTSKSTEALMATRPE 2202
            ..::          |..|||.|.:...:.|
Zfish  1222 SVDR----------PKRSKSEERVRERKRE 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698 12/68 (18%)
ASF1_hist_chap 1535..1733 CDD:304562 36/205 (18%)
PolyA 2498..2561 CDD:197769
HECTc 2589..2885 CDD:238033
HECTc 2589..2884 CDD:214523
LOC556872XP_021334149.1 PDZ_signaling 24..88 CDD:238492
NK 111..>190 CDD:327404
PDZ_signaling 365..440 CDD:238492 20/113 (18%)
PDZ 722..791 CDD:238080 17/78 (22%)
PDZ_signaling 893..980 CDD:238492 18/86 (21%)
PDZ_signaling 1017..1093 CDD:238492 22/88 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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