DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hyd and Magi2

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:XP_006535806.1 Gene:Magi2 / 50791 MGIID:1354953 Length:1414 Species:Mus musculus


Alignment Length:829 Identity:160/829 - (19%)
Similarity:254/829 - (30%) Gaps:296/829 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  2135 NVTNK-AEGSTDSNIYVQLKKKQGSDDFKSHKEADGNQSKYEKVVLMETDDSLPSTSKSTEALMA 2198
            |||:: ..|:|.|                    |:|.:.:.:.|..||.....|...:..|..:.
Mouse   197 NVTDQILPGATPS--------------------AEGKRKRNKSVTNMEKASIEPPEEEEEERPVV 241

  Fly  2199 TRPEVIIAPNKASVSPATAARSVIVLAGGSCLKTIDSDINNYSASNLSTAEQAKCDTQYQKST-- 2261
            ....|:|.|..:.....:|.      |.|      ::....|.|...|..|:.|......|.|  
Mouse   242 NGNGVVITPESSEHEDKSAG------ASG------ETPSQPYPAPVYSQPEELKDQMDDTKPTKP 294

  Fly  2262 -----SDHL-----LLFPARGSQFYQSNFSELPSW-----------------NFLLSRW-KLTLD 2298
                 ||.|     :.:..:|..::..:.::..||                 |.|...| |:...
Mouse   295 EENEDSDPLPDNWEMAYTEKGEVYFIDHNTKTTSWLDPRLAKKAKPPEECKENELPYGWEKIDDP 359

  Fly  2299 LFGRVFMDDVG----------------MEHGSVLPELRGFPVKEMRFRRHMEKLRNGQQRDLVLC 2347
            ::|..::|.:.                .:|.....||...|::...||......|:..|.     
Mouse   360 IYGTYYVDHINRRTQFENPVLEAKRKLQQHNMPHTELGAKPLQAPGFREKPLFTRDASQL----- 419

  Fly  2348 KLERNRESLIVQTFKELNTQFGNQSRRIQPPITFNRVKVTFKDEPGEGSGVARS----FYTSIAE 2408
                 :.:.:..|.|:.|..||........|..|.:||....|.|....|...:    .|.:   
Mouse   420 -----KGTFLSTTLKKSNMGFGFTIIGGDEPDEFLQVKSVIPDGPAAQDGKMETGDVIVYIN--- 476

  Fly  2409 ALLASAKIPNLESVQVGTNHSKYVVPFSSILRSRTVSGSSRDQSTLQRRG----------SNSKI 2463
                       |...:|..|:..|..|.|:...::|       :.:..||          :||.:
Mouse   477 -----------EVCVLGHTHADVVKLFQSVPIGQSV-------NLVLCRGYPLPFDPEDPANSMV 523

  Fly  2464 LWRSARERKALNLDARPYTPP---NSSDN---------ATPESLND------HLSVHLQ----QI 2506
                    ..|.:..||  ||   |...|         .|.:|:.|      | |:|..    |:
Mouse   524 --------PPLAIMERP--PPVMVNGRHNYETYLEYISRTSQSVPDITDRPPH-SLHSMPADGQL 577

  Fly  2507 GERLYPKIHSIN-------QTHAPKITGMLLEIPTPQLLSVISSDETLRQKVNEAIE-------- 2556
            .....|.:|..|       .|.|..:|  |..:...|......:|....|:|.:.::        
Mouse   578 DGTYPPPVHDDNVSMASSGATQAELMT--LTIVKGAQGFGFTIADSPTGQRVKQILDIQGCPGLC 640

  Fly  2557 ----IITFKQKSETSAQSSQPKKSPSVVVVD-----PVDDDNEPL-----FYSPGKRGFYTPRQG 2607
                |:...|::..:...::        |||     ||..:...:     |:||.|    ||:  
Mouse   641 EGDLIVEINQQNVQNLSHTE--------VVDILKDCPVGSETSLIIHRGGFFSPWK----TPK-- 691

  Fly  2608 FASFERINAFRNIG----RLIGLCLLQNELLPLFLQRHVLKYILGRKIKFHD-LAFFDP------ 2661
                ..::.:.|.|    .|....:.||...|..|.|.          .|.| ...|||      
Mouse   692 ----PMMDRWENQGSPQTSLSAPAVPQNLPFPPALHRS----------SFPDSTEAFDPRKPDPY 742

  Fly  2662 ALYESFRQIIQNAQT----------------KEGEETINRMELCF--------------VIDLMK 2696
            .|||..|.|.::.|.                ||.:..:.|||..|              :|..:.
Mouse   743 ELYEKSRAIYESRQQVPPRTSFRMDSSGPDYKELDVHLRRMESGFGFRILGGDEPGQPILIGAVI 807

  Fly  2697 EEGCGNRE--LIPGGRDVAVTSSNIFEYVRRYTEYRLIKSQEKALEALKDGVFDVL---PDNSMI 2756
            ..|..:|:  |.||...|.|....:.....||                   |.|::   ..|..:
Mouse   808 AMGSADRDGRLHPGDELVYVDGIPVAGKTHRY-------------------VIDLMHHAARNGQV 853

  Fly  2757 NLTAEDLRLLL--------NGVGDINVSTLIS-----YTTFNDESSEGP 2792
            |||..  |.:|        ||....:|||..|     |.|:::.:...|
Mouse   854 NLTVR--RKVLCGGEPCPENGRSPGSVSTHHSSPRSDYATYSNSNHAAP 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562
PolyA 2498..2561 CDD:197769 16/85 (19%)
HECTc 2589..2885 CDD:238033 58/268 (22%)
HECTc 2589..2884 CDD:214523 58/268 (22%)
Magi2XP_006535806.1 PDZ_signaling 22..96 CDD:238492
NK 118..290 CDD:388413 24/124 (19%)
WW 303..332 CDD:366073 4/28 (14%)
WW 349..378 CDD:366073 5/28 (18%)
PDZ 427..508 CDD:214570 20/101 (20%)
PDZ 601..682 CDD:214570 13/90 (14%)
MAGI_u5 681..755 CDD:374709 24/93 (26%)
PDZ 774..860 CDD:214570 22/106 (21%)
PDZ_signaling 919..1006 CDD:238492
PDZ_signaling 1138..1218 CDD:238492
MAGI_u1 1245..1285 CDD:374706
PHA03307 <1255..>1407 CDD:223039
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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