DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hyd and kibra

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:NP_001034055.1 Gene:kibra / 41783 FlyBaseID:FBgn0262127 Length:1288 Species:Drosophila melanogaster


Alignment Length:1174 Identity:210/1174 - (17%)
Similarity:343/1174 - (29%) Gaps:448/1174 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   709 AAAATSSTSNTASTSKEEGKEDDWQQCRLLRREDVQIFR----------------TAMSTRGPDW 757
            ||:.:|..|:::|.|:.:.:         |.|.|:.:.|                .:.:.||.:.
  Fly   182 AASRSSLCSSSSSMSRHDPE---------LLRADLMLARERVHQLKQELTHITNDISYTERGMNT 237

  Fly   758 LQKQPKKINVGGDAAGAQILTLAVDSRGIHVIKKVLGKIHYSLY-----------NLYNCKQEQN 811
            |....:|||...:.        ..|...:|.|::.:.|:|.||.           :|...|.|..
  Fly   238 LYSVGEKINARENG--------CYDIAEVHAIREEMLKVHKSLVSGEKVREELMRSLVQIKNELG 294

  Fly   812 CLFPTDCNSFIGSTPGNILMACNDDCSGNSSTIVLRDGNGALYPLAKDCLGSIKDPQWFDLPPVK 876
            ....::.||.:.|....:.:|...|..|:|...:  :|......:||.   ..:..:|  ...:|
  Fly   295 RQQISEENSDLASPFDRVCVASQTDLCGSSGENL--NGGARFAEMAKT---KWQYAEW--RKHIK 352

  Fly   877 SITMSTISLPAMLSGVNLKSKVCMTALLFDTQKLMPHILRCDVKNSFAALGRLEREDQA--DTAL 939
            .:..........:....|:|......|:.:.:||:..:      ||.:...|.|.|.:.  .|..
  Fly   353 KLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDL------NSISLKSRSEEEKRVIHQTRH 411

  Fly   940 VVEE----------RCDGARNIFHACVIMCAPSSNKDSPPDSPSGGVEKKSLVGLSVARSIPTVS 994
            .:||          .|...|..||                       |:|.|:...:..::.  |
  Fly   412 KLEEDLKEAYEANNTCVANRLRFH-----------------------EEKQLLLDKLQEALK--S 451

  Fly   995 TSAYVSSIAFGASASSSNENSSFATMSSSAAGSASSTSRDNRTNLRDMMNRLINSDQAEQSGSQP 1059
            |......:      .|.:..|:|:..|.|:.||.|:.|..:..:..|:                 
  Fly   452 TKLLEERL------KSFSSESTFSISSGSSLGSLSTASSKSALSFTDI----------------- 493

  Fly  1060 MATNNEDHAYIPWPAETPAASNLSASSSQNVSDSIEDDISKIIPSSSQSSMLSNIKLGSPTYTFD 1124
                     ||     .|.|                                    :.||....|
  Fly   494 ---------YI-----DPFA------------------------------------VDSPIDVVD 508

  Fly  1125 LAQRREHALTILQQMCVSPALRPYLCHMLSTK-------DAQGQTPFMLSVSCRAYEAGIILLNT 1182
            |.:|.:......||..:.| :.|.|....|.:       ....:||   ..|...|.||      
  Fly   509 LRRRSQRLFQQHQQQRLHP-VHPVLQQQQSAEVTLSPRSSLSMETP---PASPMKYNAG------ 563

  Fly  1183 ILMLSEQDPQ-LKEAMIFPNGSPADQSPLHVICYNDTCSFTWTGADHINQNIFECKTCGLTGSLC 1246
                ::|.|| |||...:.|..||  .|.:                                   
  Fly   564 ----ADQTPQALKEEPTYANALPA--PPAY----------------------------------- 587

  Fly  1247 CCTECARVCHKGHDCKLKRTAPTAYCDCWEKCKCKALIAGNLTKRFALLCKLVSCTDLVTKFNSK 1311
                               |||.           ...|:|...:.:.|...::.|..|..|....
  Fly   588 -------------------TAPP-----------PVPISGVRARPYDLDSTVLDCMMLEAKLQKL 622

  Fly  1312 GESILLFL----IQTVGRQ--IVEQRQYRFSVRVRNVSTAAT----GATGNNSVISNR---KTSA 1363
            .....|.|    :..:..:  :::..|...|   |:.||:.|    .|..|.||..:.   :.|.
  Fly   623 NMGTPLNLAVAPLSPISEKPSLLDLPQEMLS---RSSSTSNTRSVSAAVSNESVAGDSGVFEASR 684

  Fly  1364 AEIDNDMPDHDLEPPKFARK----------ALER---LLIDWNAVRSMIMSGAERGDV------- 1408
            |.    :|..:|...:...|          :|||   ||..|.|       .|:...|       
  Fly   685 AH----LPRKELAQVQIGLKYLKQEGVLVVSLERANNLLALWTA-------SADNSQVYLRAALL 738

  Fly  1409 PNPAGSASENSNSEGFNMFIQTQH-GSTLLDKFTHSLIVKCTSDHLDTLLLTLVRELQNASVSNR 1472
            ||...|             |:|:. |......|..:..|..|.|.|      |.:.|| .:|...
  Fly   739 PNSLTS-------------IRTKALGDFQKPVFNDTFAVPITLDKL------LTKSLQ-VTVVTM 783

  Fly  1473 SKEAEEVVRRFVRSVARVFVIFNLEKQPNPEKRKSHSSCNKYVQSCVKVFQTLHKISIEELCEVS 1537
            :.:.||::.....|:|..          |||            .|.:|.:..|            
  Fly   784 TGQKEEIIGTVQISMAEF----------NPE------------DSTLKWYNVL------------ 814

  Fly  1538 EALIAPVRLGVVRPTAPFTMSSSNLDVRNSDDLFSVDPLAPSNVESPSEQILVHDAGNDQSANFN 1602
                          ::.|..|..:||:.::....:...:|.||..:|         ||:      
  Fly   815 --------------SSKFIPSFESLDIPSTSAAAAAAAVAASNAPNP---------GNN------ 850

  Fly  1603 IQQNYDVVAMETIRDASESEEVINREANSHNQDDELIENQR-------------------NEDGM 1648
                         |:.|..|..|     :.:|...|..||.                   ||...
  Fly   851 -------------REESSDESTI-----TSSQTSTLTRNQAPCMELQEQMAAELLGLGPLNEPEC 897

  Fly  1649 QDDESDNDFTFNDAETESDSDDNQSNQEV-------------QRSVQAGATVGSENDIGVLFLED 1700
            .||:.|::        |.:.||.|...:|             |...|..|...:..|...| .|.
  Fly   898 SDDDDDDE--------EEELDDKQLVSDVGLMNSSSMLHAYLQNMKQEFADKETNTDRAYL-PEK 953

  Fly  1701 ESGDSSAQEEDGSEDGESDDQSDEFNFNEQ--QLERRSTNSNARSDLAPQTMQWAIRSRDTARSS 1763
            ..|.|...::...:..::...|:.|:.|..  :|.|..::|.....:||.|.|.....|.:.|..
  Fly   954 SRGQSQLMDDRPVKRSQTFTPSEAFSKNRYNCRLNRSDSDSAMHCGVAPHTFQRGAAERRSLRFH 1018

  Fly  1764 VRVP 1767
            .:.|
  Fly  1019 SKAP 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698 3/66 (5%)
ASF1_hist_chap 1535..1733 CDD:304562 39/231 (17%)
PolyA 2498..2561 CDD:197769
HECTc 2589..2885 CDD:238033
HECTc 2589..2884 CDD:214523
kibraNP_001034055.1 WW 57..87 CDD:238122
WW 103..132 CDD:278809
C2_Kibra 693..813 CDD:176062 34/168 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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