DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hyd and CG3356

DIOPT Version :9

Sequence 1:NP_001287262.1 Gene:hyd / 41181 FlyBaseID:FBgn0002431 Length:2887 Species:Drosophila melanogaster
Sequence 2:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster


Alignment Length:1331 Identity:253/1331 - (19%)
Similarity:448/1331 - (33%) Gaps:455/1331 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1712 GSEDGESDDQSDEFNFNEQQLERRSTNSNARSDLAPQTMQWAIRSRDTARSSVRVPTGSNMVFID 1776
            |.:||..:|:|..|      |.||            ....::||.   |:.|.|:......:...
  Fly    79 GHKDGIVEDESLTF------LLRR------------LNFFYSIRE---AKDSERLIEVCQQILRQ 122

  Fly  1777 PMALRRSTVPASTTV--TTPSIEPHTMATTASNLARAFGITIRQISELISILSYNVLNDIETSLK 1839
            |..|.:.:.|.|..:  ....::...:..:.|:.|:|  |.:|.:.      ::..::.::..:|
  Fly   123 PARLLQHSSPDSLWLLRLCKLLDTCLLQLSLSHTAQA--IPLRMLE------TFTTVSSVQQYMK 179

  Fly  1840 IQNDEAIAVQAFVEK------------RLKATWDWMFTVMDG---------TEAQLKF------- 1876
               |||:..| ::|:            ||:...|.....:||         .||.|:.       
  Fly   180 ---DEAVLFQ-YMERVFGFLIARNYFVRLRRLLDDKCPPLDGETLHAPSPLAEALLQLLLRPLEV 240

  Fly  1877 ------GAYL-----------------TNYTDPNH----PLHPLN--------LSAQASSSQTPA 1906
                  |..:                 |.:|||..    |...||        :.:...:.::..
  Fly   241 AKRASAGGQMSSMSMAVCRNFTRDILATPHTDPLRYFVLPCFALNVDFPFDLLMRSLYDALESAG 305

  Fly  1907 PATSSSVNGVNIMGSNSRRDFFTYCLSLMRSHTSEHRD---------ALPVLDITALRHIAYVLD 1962
            ||.|.|        ::|||.|..|  .:...|.:...|         :|.|||   .|.:|.:..
  Fly   306 PAESDS--------TSSRRSFLFY--GVETGHKTTRMDSIFSSFLLNSLMVLD---RRQLATLHQ 357

  Fly  1963 A--FVYYMRNDSGFYDK-----QDTISGRINNLSP---------MTESYDTDDELANLEEFNADV 2011
            :  .|.|:|..:.....     :.|:.|..|  :|         ..||.|.|:||......:.|:
  Fly   358 SPLLVIYVRLIAEMMPNILQLPKSTLRGHAN--APHRHRDGDDDSEESEDEDEELPAARTLDYDM 420

  Fly  2012 QMSASSMPSGSQGTRRHAFFARSESTLSLGCSAPEGFELPLDMAMPLADKPHLLQPNSKRQELFA 2076
            :.:..:  ||....:.......|.:.|    :..|..:..:....|..:..||:....   |:..
  Fly   421 EQTCRT--SGELSVKERECLLESIAIL----NETERVDFIVQQLDPHIENTHLIYALC---EICH 476

  Fly  2077 NLPLLVTTNANNSGATNDGDGGSIFDY--------TP--------------TRLGFSNSL----- 2114
            ||.:.      |..|        :|:|        ||              |:||||..|     
  Fly   477 NLMIY------NKHA--------VFEYKLLYTLAFTPKFIRAVWFKLAAESTQLGFSAPLTLISK 527

  Fly  2115 ---KRNERVYETVPIDSSKTGDGNVTNKAEGSTDSNIYVQLKKKQGSDDFKSHKEADGNQSKYEK 2176
               .:::.|..|:|:               .:|...::.:|.......:|..:|           
  Fly   528 GVVPKHQGVDRTIPL---------------LATFCMLFGRLLPTLHDVEFVENK----------- 566

  Fly  2177 VVLMETDDSLPSTSKSTEALMATRPEVIIAPNKASVSPATAARSVIVLAGGSCLKTID------- 2234
             :|::...::                     |...:.|.:.|.   ::.....||.|.       
  Fly   567 -LLLQVHSTI---------------------NHVRLMPFSIAE---IIQMSKTLKDISMGLVELA 606

  Fly  2235 -----SDINNYSASNLSTAEQAKCDTQYQKSTSDHLL---LFPARGSQFYQSNFSELPSWNFLLS 2291
                 |::.|| ...|...|......::||....:||   :|...............|..::.::
  Fly   607 FPETRSNLANY-RKVLGHTEADDKKLRHQKQIWANLLNVVVFVLNQIHTRDLRLGFCPEDHWTVT 670

  Fly  2292 RWKLTLDLFGRVFMDDVGMEHGSVLPELRGF-PVKEMRFRRHMEKLRNGQQRDLVLCKLERNRES 2355
            |..|.||.     ..|:.:.|.|.|..:|.| |:::  |.|  |...||                
  Fly   671 RLDLPLDR-----PTDLPLTHSSRLRGIRPFQPIRD--FTR--EDFENG---------------- 710

  Fly  2356 LIVQTFKELNTQFGNQSRRIQPPITFNRVKVTFKDEPGEGSGVARSFYTSIAEALLASAKIPNLE 2420
                                 ||::..:::                       ::....:||   
  Fly   711 ---------------------PPMSTKQIR-----------------------SITILREIP--- 728

  Fly  2421 SVQVGTNHSKYVVPFS---SILRSRTVSGSSRDQSTLQRRGSNSKILWRSARERKALNLDARPYT 2482
                      :||||:   |||:|...:...|.|..:|.......:|                  
  Fly   729 ----------FVVPFNKRVSILQSLVAASKMRVQGNMQAFLQGPSVL------------------ 765

  Fly  2483 PPNSSDNATPESLNDHLSVHLQQIGERLYPKIHSINQTHAPKITGMLLEIPTPQLLSVISSDE-- 2545
                            ::|....:.|..|.|:...|:   |.:. ....|   |.:|.:..||  
  Fly   766 ----------------ITVRRSHLYEDAYDKLRPDNE---PDLR-FKFRI---QFVSSLGLDEAG 807

  Fly  2546 -----TLRQKVNEAIEIITFKQKSETSAQSSQPKKSPSVVVVDP------VDDDNEPLFYSPGKR 2599
                 ..|:.::|.|:                       ...||      |..||: |:.:|...
  Fly   808 IDGGGVFREFLSELIK-----------------------TAFDPNRGFFMVTTDNK-LYPNPNVA 848

  Fly  2600 GFYTPRQGFASFERINAFRNIGRLIGLCLLQNELLPLFLQRHVLKYILGR--KIKFHDLAFFDPA 2662
            ..      |..:|:...|  |||::|..:.:|.|:.|.|....|..:.|:  .:..|.||..||.
  Fly   849 DL------FEDYEKHYYF--IGRILGKSIYENLLVELPLAEFFLTKLAGKYSDVDIHQLASLDPE 905

  Fly  2663 LYESFRQIIQNAQTKEGEETINRMELCFVIDLMKEEGCGNRELI---PGGRDVAVTSSNIFEYVR 2724
            ||.:...:      |:....::.:.|.|.:   .....|..:::   |.|:.:.||:||..||::
  Fly   906 LYRNLLYL------KDYSGDVSELNLDFTV---ASSSLGQTQIVELKPQGQSIPVTNSNRIEYLQ 961

  Fly  2725 RYTEYRLIKSQEKALEALKDGVFDVLPDNSMINLTAEDLRLLLNGVG-DINVSTLISYTTFNDE- 2787
            ...:|:|.....:...|.:.|:.:|||...:...:.::|::|::|.. .|::..|..:..:..| 
  Fly   962 LIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIPIDLEDLKKHCEYGGEF 1026

  Fly  2788 SSEGPDKLLKFKKWFWSIVEKMNIMERQDLVYFWTGSPALPASEEGFQPL--PSVTIRPADDSHL 2850
            |.|.|..:.     ||.::|..:.|:|:.|:.|.|.....|..  ||:.|  |.......|...|
  Fly  1027 SPEHPSIVT-----FWEVLEGFDDMQRRQLLKFVTSCSRPPLL--GFKDLDPPFFIQNTGDMERL 1084

  Fly  2851 PTANTCISRLYIPLYSSKSILRSKMLMAIKS 2881
            |||:||.:.|.:|.:.:...:|.|:|.||:|
  Fly  1085 PTASTCTNLLKLPPFKTVEQMREKLLYAIQS 1115

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hydNP_001287262.1 E3_UbLigase_EDD 150..196 CDD:288409
ZnF_UBR1 1217..1284 CDD:197698
ASF1_hist_chap 1535..1733 CDD:304562 6/20 (30%)
PolyA 2498..2561 CDD:197769 14/69 (20%)
HECTc 2589..2885 CDD:238033 79/302 (26%)
HECTc 2589..2884 CDD:214523 79/302 (26%)
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 97/405 (24%)
HECTc 788..1119 CDD:214523 91/380 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446981
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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